Non-Coding RNA Search

Ss1.1-rsug12_i4.5

Sequence:


               
               GTACTTTTCATAGCTGAGAAAACAGAGCTATGTGAATAAAACCAGGCTGTGGTTATCAAG
TCTTTGAATTGTGAATATTAGCATTCTTTGATGAGTTTTTTTGTTTTTTTTGTTTTTAAT
ATATAATCCCCAGTTATGAAGCACCTTGGTTATGGAAGGAAAAGTTCTAACCATTTTTTT
GAAACAAATTTCATCATGTAAAAGGTGATTTGACTCAATCATGTAGAGAAATCACATTCG
GGAAGTGAGACTCTTAGCTGAAATATTTGTTCGTGCATTGTCTGAGTTTTGACGCCTCTA
ACTTCTCAGAATGATTCTGGTTTTTAGAATTCCATATTTAATAGCAGTTGATGACAACTA
AGACTACGTGTTAGAAACATCTATAAAAGTTCTACTGTTTTACATTGTGGATTGCTATGC
AGACAAGAAAAATAAGTTAATATGAAAGATGTGGCACGATTTAAGGTGGAAAGGATTATC
TACAAATTTGGGTTTTAGGTCAAAGTGTTTGTGTCCGACAGACAGGTGGTTTTTGACTGT
AAAGATGTCGACAACTGATTCGGCTGTCTGATCAGTGTTGCCTCACAGCCCTCCACCTCT
AGCGAGAGAGCAGCCAAGTTACCCAGAAACGTGGAAACCCGGCATGTGTTTCACTGCTGG
TATTTCATCTGGTATGACTATAACTCAGCTTGAATGAATGTGTTTGTTGAGATGTTGATA
CAACGCTCAAGAAGAGGAAGAATAAATTTGTTGGCACATGAAATAATAGTGGCTGAAAGT
TGGTGATCTTGTGTCACTATTTATTTTTTGCCCTGATCAGACTAGCAGCTAAATAAGTGA
AAGTTTTTCTAACATGCCTTAAAAATGTTATGGTTTGATCCAAAGACCCGCTTTTTCTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTACTTTTCATAGCTGAGAAAACAGAGCTATGTGAATAAAACCAGGCTGTGGTTATCAAG
TCTTTGAATTGTGAATATTAGCATTCTTTGATGAGTTTTTTTGTTTTTTTTGTTTTTAAT
ATATAATCCCCAGTTATGAAGCACCTTGGTTATGGAAGGAAAAGTTCTAACCATTTTTTT
GAAACAAATTTCATCATGTAAAAGGTGATTTGACTCAATCATGTAGAGAAATCACATTCG
GGAAGTGAGACTCTTAGCTGAAATATTTGTTCGTGCATTGTCTGAGTTTTGACGCCTCTA
ACTTCTCAGAATGATTCTGGTTTTTAGAATTCCATATTTAATAGCAGTTGATGACAACTA
AGACTACGTGTTAGAAACATCTATAAAAGTTCTACTGTTTTACATTGTGGATTGCTATGC
AGACAAGAAAAATAAGTTAATATGAAAGATGTGGCACGATTTAAGGTGGAAAGGATTATC
TACAAATTTGGGTTTTAGGTCAAAGTGTTTGTGTCCGACAGACAGGTGGTTTTTGACTGT
AAAGATGTCGACAACTGATTCGGCTGTCTGATCAGTGTTGCCTCACAGCCCTCCACCTCT
AGCGAGAGAGCAGCCAAGTTACCCAGAAACGTGGAAACCCGGCATGTGTTTCACTGCTGG
TATTTCATCTGGTATGACTATAACTCAGCTTGAATGAATGTGTTTGTTGAGATGTTGATA
CAACGCTCAAGAAGAGGAAGAATAAATTTGTTGGCACATGAAATAATAGTGGCTGAAAGT
TGGTGATCTTGTGTCACTATTTATTTTTTGCCCTGATCAGACTAGCAGCTAAATAAGTGA
AAGTTTTTCTAACATGCCTTAAAAATGTTATGGTTTGATCCAAAGACCCGCTTTTTCTTT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               454-878, gnl|bosTau2|chr7 (8744789-8745231)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               454-878, gnl|bosTau2|chr7 (8744789-8745231)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               liv (0.146284)
               

               
               sug (0.127291)
               

               
               cbl (0.114797)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)
               

               
               sug (0.127291)
               

               
               cbl (0.114797)