Ss1.1-rsug21_d24.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGCGGGAGGGCCCCGAGACCTGAAAATGCTCTGTGCAGAAGAAGAGCAGAGTAGGACGT GCTGGGTGACCGCGATTAGATTGCTTAAGTATGGCATGCAGCTGTACCAGAATTACATGC ATCCATATCAAGGTAGAAGTGGCTGCAGTTCCCAGAGTATATCACCCATGAGAAGTATAT CAGAGAATTCCCTGGTAGCAATGGACTTCTCAGGCCAGAAAAGCAGAGTTATAGAAAATC CCACTGAGGCCCTTTCAGTTGCAGTTGAAGAAGGACTAGCTTGGAGGAAAAAAGGATGTT TACGCCTGGGCACTCATGGTAGCCCCACTGCCTCTTCACAGAGCTCTGCCACCAACATGG CTATTCACCGGTCTCAACCATGGTTTCACCACAAAATTTCTAGAGATGAAGCTCAGCGAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGCGGGAGGGCCCCGAGACCTGAAAATGCTCTGTGCAGAAGAAGAGCAGAGTAGGACGT GCTGGGTGACCGCGATTAGATTGCTTAAGTATGGCATGCAGCTGTACCAGAATTACATGC ATCCATATCAAGGTAGAAGTGGCTGCAGTTCCCAGAGTATATCACCCATGAGAAGTATAT CAGAGAATTCCCTGGTAGCAATGGACTTCTCAGGCCAGAAAAGCAGAGTTATAGAAAATC CCACTGAGGCCCTTTCAGTTGCAGTTGAAGAAGGACTAGCTTGGAGGAAAAAAGGATGTT TACGCCTGGGCACTCATGGTAGCCCCACTGCCTCTTCACAGAGCTCTGCCACCAACATGG CTATTCACCGGTCTCAACCATGGTTTCACCACAAAATTTCTAGAGATGAAGCTCAGCGAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 19 entry(ies) | More info |
| Aligned organism(s): 19 entry(ies) | Help | Less info |
| 170-287, gnl|bosTau2|chr2 (24249696-24249579) | |
| 170-287, gnl|canFam2|chr36 (12726236-12726369) | |
| 170-287, gnl|danRer3|chrNA (47611056-47611195) | |
| 170-287, gnl|dasNov1|scaffold_4982 (14686-14812) | |
| 170-287, gnl|echTel1|scaffold_293659 (121615-121484) | |
| 170-287, gnl|fr1|chrUn (132631508-132631645) | |
| 170-287, gnl|galGal2|chr7 (20981088-20980954) | |
| 170-287, gnl|hg17|chr2 (165179390-165179524) | |
| 170-287, gnl|Hg17|chr2 (165179508-165179391) | |
| 170-287, gnl|loxAfr1|scaffold_10780 (14815-14958) | |
| 170-287, gnl|mm7|chr2 (64847747-64847893) | |
| 170-287, gnl|Mm7|chr2 (64847865-64847748) | |
| 170-287, gnl|monDom2|scaffold_2 (60362945-60363079) | |
| 170-287, gnl|oryCun1|scaffold_209716 (154879-154745) | |
| 170-287, gnl|panTro1|chr13 (54577230-54577364) | |
| 170-287, gnl|rheMac2|chr12 (28137520-28137654) | |
| 170-287, gnl|rn3|chr3 (46732860-46733007) | |
| 170-287, gnl|tetNig1|chr2 (11830349-11830212) | |
| 170-287, gnl|xenTro1|scaffold_518 (550097-549963) |
| Aligned organism(s): 19 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 170-287, gnl|bosTau2|chr2 (24249696-24249579) | |
| 170-287, gnl|canFam2|chr36 (12726236-12726369) | |
| 170-287, gnl|danRer3|chrNA (47611056-47611195) | |
| 170-287, gnl|dasNov1|scaffold_4982 (14686-14812) | |
| 170-287, gnl|echTel1|scaffold_293659 (121615-121484) | |
| 170-287, gnl|fr1|chrUn (132631508-132631645) | |
| 170-287, gnl|galGal2|chr7 (20981088-20980954) | |
| 170-287, gnl|hg17|chr2 (165179390-165179524) | |
| 170-287, gnl|Hg17|chr2 (165179508-165179391) | |
| 170-287, gnl|loxAfr1|scaffold_10780 (14815-14958) | |
| 170-287, gnl|mm7|chr2 (64847747-64847893) | |
| 170-287, gnl|Mm7|chr2 (64847865-64847748) | |
| 170-287, gnl|monDom2|scaffold_2 (60362945-60363079) | |
| 170-287, gnl|oryCun1|scaffold_209716 (154879-154745) | |
| 170-287, gnl|panTro1|chr13 (54577230-54577364) | |
| 170-287, gnl|rheMac2|chr12 (28137520-28137654) | |
| 170-287, gnl|rn3|chr3 (46732860-46733007) | |
| 170-287, gnl|tetNig1|chr2 (11830349-11830212) | |
| 170-287, gnl|xenTro1|scaffold_518 (550097-549963) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| sug (0.254582) | |
| fcc (0.197785) | |
| kid (0.129735) | |
| pgl (0.118483) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sug (0.254582) | |
| fcc (0.197785) | |
| kid (0.129735) | |
| pgl (0.118483) |