Non-Coding RNA Search

Ss1.1-rsug21_f16.5

Sequence:


               
               GTATGCAGACATATTTCTATAAAGCTGTAATCATATATAGACTCAATTTTGTATTCTGCT
CTTTTCAGTAAACCTTAAGCAAATGTTTTCCAAATGGTTGCATAGTTGTCAGGATGATTT
TTAGTGGTCTTACAGTCTGTCATCCCACAGGCTGAGTTTATTTAATCATTCATCTATTAT
TGGACATTAGATTTTCTTCCCTATGGTTTTGGGCTATTATAAATAATACTTGGAAATACA
GCTTCATCCTTATTGTTCATTAGTTCCTTAGGGTAAATTTCTAAGAGCAGGATTTCTGGG
TCAAAGAGCACAAACATTTTTTTGGCTCCCCATGCATATTGCTACATTGCTTTTCAGAGG
CTTGTAGCAGTCCTCAGTGCCATCAGCAGTGCAGTAAGGTACCAGTTTCAACATCTTGGC
CTGCATTAGATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTATGCAGACATATTTCTATAAAGCTGTAATCATATATAGACTCAATTTTGTATTCTGCT
CTTTTCAGTAAACCTTAAGCAAATGTTTTCCAAATGGTTGCATAGTTGTCAGGATGATTT
TTAGTGGTCTTACAGTCTGTCATCCCACAGGCTGAGTTTATTTAATCATTCATCTATTAT
TGGACATTAGATTTTCTTCCCTATGGTTTTGGGCTATTATAAATAATACTTGGAAATACA
GCTTCATCCTTATTGTTCATTAGTTCCTTAGGGTAAATTTCTAAGAGCAGGATTTCTGGG
TCAAAGAGCACAAACATTTTTTTGGCTCCCCATGCATATTGCTACATTGCTTTTCAGAGG
CTTGTAGCAGTCCTCAGTGCCATCAGCAGTGCAGTAAGGTACCAGTTTCAACATCTTGGC
CTGCATTAGATA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               3-432, gnl|bosTau2|chr15 (23891831-23891395)
               

               
               3-432, gnl|Hg17|chr11 (12700908-12701341)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-432, gnl|bosTau2|chr15 (23891831-23891395)
               

               
               3-432, gnl|Hg17|chr11 (12700908-12701341)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

Help | Less info


               
               aor (0.390549)
               

               
               sug (0.127291)
               

               
               bla (0.124347)
               

               
               tra (0.123092)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.390549)
               

               
               sug (0.127291)
               

               
               bla (0.124347)
               

               
               tra (0.123092)

	3-432, gnl\|bosTau2\|chr15 (23891831-23891395)
	3-432, gnl\|Hg17\|chr11 (12700908-12701341)