Ss1.1-rsug22_n22.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAAAAAGACATACTGACTTTGTGGGGAGGCCACTTTTGCTCCTATCTGCTTCCAAAGTAT CAGATAATTGACATGTAGTGGCTAGGTGACAGGAGAGCAAACCTCCCAGCAAAAAAAGAC TCAAGCTTCCTTGCCCCCTGCCCCCCCACTGGGAAAATGTGAATACTGAGGTGCCTTATC AGCTTATCACTTTGCACAATCAAACACATGAATATAATGAAGTTGCTAGTCTCTTAGAGA AAACAATGGATCGCAACAGAATTAAAAGAATTCAGAGAATTCAAAACCTAGACTTGTGGG AGTTCTTTTGCAGGAAAAAGGCTCAGCTCAAGAAAAAAAGAGGCGTGCCTCAGATTAACG AACAGATGCTGTTTCATGGCACCAGCAGCGAGTTTGTAGAAGCAATTTGCATTCATAACT TTGATTGGAGAATAAACGGCATTCATGGTGCTCTCTTTGGAAAAGGAACCTATTTTGCTA GAGATGCAGCTTACTCCAGCCGCTTCTGCAAAGATGACATAAAGCATGGAAACACATTCC AGATTCACGGCGTAAGCTTGCAGCAGCGGCATCTGTTCAGAACATATAAGTCAATGTTTC TCGCTCGAGTGCTCATTGGAGATTACATAAACGGAGACTCCAAGTACATGCGCCCCCCTT CCTAAGACGGGAGCTACGTGAATTTATACGACAGCTGTGTGGATGACACCTGGAACCCCA AGATCTTCGTGGTGTTTGATGCCAACCAGATCTACCCGGAGTACTTAATAGACTTCCACT GATTTCACATCCAAGTCAGGGGGCAAGGAAGCTTGAGTCTTTTTTGCTGGGAGGTTTGCT CTCCTGGCACCTAGCCACTACATGTCAATTATCTGATACTTTGGAAGCAGATCGGAACAA AAGTGGCCCTCCCATAAAAAAGACATACTGACTTTGTGGGTGGGTTTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAAAAAGACATACTGACTTTGTGGGGAGGCCACTTTTGCTCCTATCTGCTTCCAAAGTAT CAGATAATTGACATGTAGTGGCTAGGTGACAGGAGAGCAAACCTCCCAGCAAAAAAAGAC TCAAGCTTCCTTGCCCCCTGCCCCCCCACTGGGAAAATGTGAATACTGAGGTGCCTTATC AGCTTATCACTTTGCACAATCAAACACATGAATATAATGAAGTTGCTAGTCTCTTAGAGA AAACAATGGATCGCAACAGAATTAAAAGAATTCAGAGAATTCAAAACCTAGACTTGTGGG AGTTCTTTTGCAGGAAAAAGGCTCAGCTCAAGAAAAAAAGAGGCGTGCCTCAGATTAACG AACAGATGCTGTTTCATGGCACCAGCAGCGAGTTTGTAGAAGCAATTTGCATTCATAACT TTGATTGGAGAATAAACGGCATTCATGGTGCTCTCTTTGGAAAAGGAACCTATTTTGCTA GAGATGCAGCTTACTCCAGCCGCTTCTGCAAAGATGACATAAAGCATGGAAACACATTCC AGATTCACGGCGTAAGCTTGCAGCAGCGGCATCTGTTCAGAACATATAAGTCAATGTTTC TCGCTCGAGTGCTCATTGGAGATTACATAAACGGAGACTCCAAGTACATGCGCCCCCCTT CCTAAGACGGGAGCTACGTGAATTTATACGACAGCTGTGTGGATGACACCTGGAACCCCA AGATCTTCGTGGTGTTTGATGCCAACCAGATCTACCCGGAGTACTTAATAGACTTCCACT GATTTCACATCCAAGTCAGGGGGCAAGGAAGCTTGAGTCTTTTTTGCTGGGAGGTTTGCT CTCCTGGCACCTAGCCACTACATGTCAATTATCTGATACTTTGGAAGCAGATCGGAACAA AAGTGGCCCTCCCATAAAAAAGACATACTGACTTTGTGGGTGGGTTTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 175-314, gnl|bosTau2|chr5 (63281864-63282003) | |
| 175-314, gnl|canFam2|chr27 (44043270-44043138) | |
| 175-314, gnl|danRer3|chr5 (54127649-54127542) | |
| 175-314, gnl|echTel1|scaffold_241222 (1049-962) | |
| 175-314, gnl|fr1|chrUn (76089832-76089708) | |
| 175-314, gnl|galGal2|chr1 (69026912-69026801) | |
| 175-314, gnl|hg17|chr12 (3801265-3801396) | |
| 175-314, gnl|Hg17|chr12 (3801438-3801299) | |
| 175-314, gnl|loxAfr1|scaffold_101418 (30669-30537) | |
| 175-314, gnl|mm7|chr6 (127503205-127503064) | |
| 175-314, gnl|Mm7|chr6 (127503020-127503159) | |
| 175-314, gnl|monDom2|scaffold_31 (21936244-21936113) | |
| 175-314, gnl|oryCun1|scaffold_215076 (65517-65645) | |
| 175-314, gnl|panTro1|chr10 (3888914-3889042) | |
| 175-314, gnl|rheMac2|chr11 (3939779-3939910) | |
| 175-314, gnl|rn3|chr4 (164169448-164169305) | |
| 175-314, gnl|tetNig1|chr19 (2401548-2401673) | |
| 175-314, gnl|xenTro1|scaffold_1061 (28595-28432) | |
| 412-946, gnl|bosTau2|chr5 (63285252-63285776) | |
| 412-946, gnl|Hg17|chr12 (3791918-3791383) | |
| 412-946, gnl|Mm7|chr6 (127516090-127516614) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 175-314, gnl|bosTau2|chr5 (63281864-63282003) | |
| 175-314, gnl|canFam2|chr27 (44043270-44043138) | |
| 175-314, gnl|danRer3|chr5 (54127649-54127542) | |
| 175-314, gnl|echTel1|scaffold_241222 (1049-962) | |
| 175-314, gnl|fr1|chrUn (76089832-76089708) | |
| 175-314, gnl|galGal2|chr1 (69026912-69026801) | |
| 175-314, gnl|hg17|chr12 (3801265-3801396) | |
| 175-314, gnl|Hg17|chr12 (3801438-3801299) | |
| 175-314, gnl|loxAfr1|scaffold_101418 (30669-30537) | |
| 175-314, gnl|mm7|chr6 (127503205-127503064) | |
| 175-314, gnl|Mm7|chr6 (127503020-127503159) | |
| 175-314, gnl|monDom2|scaffold_31 (21936244-21936113) | |
| 175-314, gnl|oryCun1|scaffold_215076 (65517-65645) | |
| 175-314, gnl|panTro1|chr10 (3888914-3889042) | |
| 175-314, gnl|rheMac2|chr11 (3939779-3939910) | |
| 175-314, gnl|rn3|chr4 (164169448-164169305) | |
| 175-314, gnl|tetNig1|chr19 (2401548-2401673) | |
| 175-314, gnl|xenTro1|scaffold_1061 (28595-28432) | |
| 412-946, gnl|bosTau2|chr5 (63285252-63285776) | |
| 412-946, gnl|Hg17|chr12 (3791918-3791383) | |
| 412-946, gnl|Mm7|chr6 (127516090-127516614) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sug (0.127291) |