Non-Coding RNA Search

Ss1.1-rsug23_e11.5

Sequence:


               
               GCTATATATTCAGGCACCTGCCGCAAGAGCTCTCAGGATGGGGACAGCCTTCTTAGACGA
GCCATGACAGCCAAGGCCTGGGGGGTAAGGACAGCATCACGCCTCCAGTGGCGTATTAAC
CCCAGAGAAGGGGAGGCAGGAGGGAGGCAGACACCGTGGCTCAGAGAGAAAGGCCTTCCC
GCTAGTCCTCAGACCCTCAAACCTCACGCGGTGACCAGTTTCCATTCCGGGGCCCGAGGA
ACGCGGCCGCCGCTGCTGCGCTGTTTAGTTGAAGTTGGTACCAAATACGCATTGACCATT
TTTCTATCTGGGAAGTCAACTTGCCGCCATGACATGATTAAAAGAAAGAAAACACCATTT
GTAAGGAGACAAGGACAGGACACGCTTTCCACGTTTCAGTATTTGATGACACAAAGTTCC
AATGCCAATGTCGGGCATCCACTTCTAGCGCTACAAGTGTGGCTCCCACTTGGACAAGAT
ACCGAGCTTCGTTATGCAGTTTTTAATATTATTTATTCTTTTAAAAAAGTAATAAGCACA
AAATTACATACATTGTATGTCATTTAAAGTATTTATGTCAAACAGGGTGCAAGTGTGAAC
CCAAGGACTGGAGCACAAGTTTCTAACTGCCTGGGGCAGGGCTAAGGTTAGCGTTGGTGT
GCGTCTGCCTCCAAAGGAGGTGTTAGTGGTCAGCGAGACTCAACACAGATGACAGTGAAA
TTCCGTTTCTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTATATATTCAGGCACCTGCCGCAAGAGCTCTCAGGATGGGGACAGCCTTCTTAGACGA
GCCATGACAGCCAAGGCCTGGGGGGTAAGGACAGCATCACGCCTCCAGTGGCGTATTAAC
CCCAGAGAAGGGGAGGCAGGAGGGAGGCAGACACCGTGGCTCAGAGAGAAAGGCCTTCCC
GCTAGTCCTCAGACCCTCAAACCTCACGCGGTGACCAGTTTCCATTCCGGGGCCCGAGGA
ACGCGGCCGCCGCTGCTGCGCTGTTTAGTTGAAGTTGGTACCAAATACGCATTGACCATT
TTTCTATCTGGGAAGTCAACTTGCCGCCATGACATGATTAAAAGAAAGAAAACACCATTT
GTAAGGAGACAAGGACAGGACACGCTTTCCACGTTTCAGTATTTGATGACACAAAGTTCC
AATGCCAATGTCGGGCATCCACTTCTAGCGCTACAAGTGTGGCTCCCACTTGGACAAGAT
ACCGAGCTTCGTTATGCAGTTTTTAATATTATTTATTCTTTTAAAAAAGTAATAAGCACA
AAATTACATACATTGTATGTCATTTAAAGTATTTATGTCAAACAGGGTGCAAGTGTGAAC
CCAAGGACTGGAGCACAAGTTTCTAACTGCCTGGGGCAGGGCTAAGGTTAGCGTTGGTGT
GCGTCTGCCTCCAAAGGAGGTGTTAGTGGTCAGCGAGACTCAACACAGATGACAGTGAAA
TTCCGTTTCTCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-732, gnl|bosTau2|chr11 (56064551-56065263)
               

               
               1-732, gnl|Hg17|chr2 (23842277-23842988)
               

               
               1-732, gnl|Mm7|chr12 (5021230-5020515)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-732, gnl|bosTau2|chr11 (56064551-56065263)
               

               
               1-732, gnl|Hg17|chr2 (23842277-23842988)
               

               
               1-732, gnl|Mm7|chr12 (5021230-5020515)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               aor (0.195274)
               

               
               ton (0.1755)
               

               
               pla (0.133672)
               

               
               sug (0.127291)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.195274)
               

               
               ton (0.1755)
               

               
               pla (0.133672)
               

               
               sug (0.127291)

	1-732, gnl\|bosTau2\|chr11 (56064551-56065263)
	1-732, gnl\|Hg17\|chr2 (23842277-23842988)
	1-732, gnl\|Mm7\|chr12 (5021230-5020515)