Non-Coding RNA Search

Ss1.1-rsug26_h22.5

Sequence:


               
               GGAACACCATCCCGCCATCTGCGCATCAACCCCCACACAGTTGCAACTCTCCACCTGAAT
CTGTGCAGCCACTCGGCCCTGAAAGATGCCCTATACATGAGATGCCTTTTCATCCGCAGC
CTCTGCAAACTATGTCACGTATTTCGCAACCTTTCCCTGTTTTTTTCTCTCCTGACATCC
CCACATCGGCATTTTCTTCCACCAGCTTTTACTGAACTTTTTGGCACTGCTTTGGATTGG
AGTCAATTGCAGTCCACGCAAATGGCTGCAGAGAAACCTACCCAGCAAGGAAAAGACGTG
CACACAAGTTTGCGGAAGTGCCTGCACTTCTGTTTGATCCGAAACGGACTCACATCCTGT
ACGGTGGATGGACTGTATATTGATGATTCCATTCTTCGCGCAGTTTAGACATCTCTGTTG
GGATTTTTTTGTTCGTTTGTTTTTTTATTTTAAAAGGCACAAGCTATAGATATTAGTTGG
ATGTTGAGGCTTTAACTTTTTTGGTGTCTTTCTACAGCTGTGTTCTGTGACTCAATTGTA
TCGTGTTAATATCAGTACAGACCGTCTCCTCTACGTGACCGTATAATGTTTTTCTCTTCT
TGTAGTCTCTATGGCGTGTCTTTATGAAATAATAAGGTTCTCACGGGTTCAATTCCTTTG
TGTTTAGAGAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAACACCATCCCGCCATCTGCGCATCAACCCCCACACAGTTGCAACTCTCCACCTGAAT
CTGTGCAGCCACTCGGCCCTGAAAGATGCCCTATACATGAGATGCCTTTTCATCCGCAGC
CTCTGCAAACTATGTCACGTATTTCGCAACCTTTCCCTGTTTTTTTCTCTCCTGACATCC
CCACATCGGCATTTTCTTCCACCAGCTTTTACTGAACTTTTTGGCACTGCTTTGGATTGG
AGTCAATTGCAGTCCACGCAAATGGCTGCAGAGAAACCTACCCAGCAAGGAAAAGACGTG
CACACAAGTTTGCGGAAGTGCCTGCACTTCTGTTTGATCCGAAACGGACTCACATCCTGT
ACGGTGGATGGACTGTATATTGATGATTCCATTCTTCGCGCAGTTTAGACATCTCTGTTG
GGATTTTTTTGTTCGTTTGTTTTTTTATTTTAAAAGGCACAAGCTATAGATATTAGTTGG
ATGTTGAGGCTTTAACTTTTTTGGTGTCTTTCTACAGCTGTGTTCTGTGACTCAATTGTA
TCGTGTTAATATCAGTACAGACCGTCTCCTCTACGTGACCGTATAATGTTTTTCTCTTCT
TGTAGTCTCTATGGCGTGTCTTTATGAAATAATAAGGTTCTCACGGGTTCAATTCCTTTG
TGTTTAGAGAGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-672, gnl|bosTau2|chr6 (31161612-31160943)
               

               
               3-672, gnl|Hg17|chr4 (41587949-41587274)
               

               
               3-672, gnl|Mm7|chr5 (66450857-66450175)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-672, gnl|bosTau2|chr6 (31161612-31160943)
               

               
               3-672, gnl|Hg17|chr4 (41587949-41587274)
               

               
               3-672, gnl|Mm7|chr5 (66450857-66450175)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               sug (0.254582)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sug (0.254582)

	3-672, gnl\|bosTau2\|chr6 (31161612-31160943)
	3-672, gnl\|Hg17\|chr4 (41587949-41587274)
	3-672, gnl\|Mm7\|chr5 (66450857-66450175)