Non-Coding RNA Search

Ss1.1-rsug27_k5.5

Sequence:


               
               ATGTTACGGCTCATTATTTTATTTCATAATTACATTTACATTTATGTAGTCATGGAGCAG
GAACTTTTTTCCTTAACATACTATGAACCATTTCCTTATGTCCACTTCGAGTTCTTTGCA
AATATAATGTTAATTTTTGTGCAATACCTCCTTGAATGTACATACTAAATTTATATAACA
ATTGCTCTGTTATTAATCATTTGGGGCTTCCCCAGTGTTTCACTAATGTAAGTAACTGTA
ATGAACAGTTTTGTACCAAAAGATTGTCTACATGTGGGATGATTTTCTCAGGATAGATCC
CCAAAAGTAGGATAACTGCATCAAAGGCCATGAATTTCCATGATAGAAACTACTTTCTGA
AAGGCTTGAACAAAGCTTGTATCCTCAGAAGCACTTACCAGTAGTGAATGTCATCATTAA
AAACAAAGCACATAAAAGTTGAAATGAAAGGACATTAGACAGTAACTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGTTACGGCTCATTATTTTATTTCATAATTACATTTACATTTATGTAGTCATGGAGCAG
GAACTTTTTTCCTTAACATACTATGAACCATTTCCTTATGTCCACTTCGAGTTCTTTGCA
AATATAATGTTAATTTTTGTGCAATACCTCCTTGAATGTACATACTAAATTTATATAACA
ATTGCTCTGTTATTAATCATTTGGGGCTTCCCCAGTGTTTCACTAATGTAAGTAACTGTA
ATGAACAGTTTTGTACCAAAAGATTGTCTACATGTGGGATGATTTTCTCAGGATAGATCC
CCAAAAGTAGGATAACTGCATCAAAGGCCATGAATTTCCATGATAGAAACTACTTTCTGA
AAGGCTTGAACAAAGCTTGTATCCTCAGAAGCACTTACCAGTAGTGAATGTCATCATTAA
AAACAAAGCACATAAAAGTTGAAATGAAAGGACATTAGACAGTAACTT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               33-467, gnl|bosTau2|chr3 (12577544-12577976)
               

               
               33-467, gnl|Hg17|chr12 (98916333-98915914)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               33-467, gnl|bosTau2|chr3 (12577544-12577976)
               

               
               33-467, gnl|Hg17|chr12 (98916333-98915914)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               mas (0.210305)
               

               
               sag (0.182715)
               

               
               lyg (0.133103)
               

               
               sug (0.127291)
               

               
               tra (0.123092)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mas (0.210305)
               

               
               sag (0.182715)
               

               
               lyg (0.133103)
               

               
               sug (0.127291)
               

               
               tra (0.123092)

	33-467, gnl\|bosTau2\|chr3 (12577544-12577976)
	33-467, gnl\|Hg17\|chr12 (98916333-98915914)

	mas (0.210305)
	sag (0.182715)
	lyg (0.133103)
	sug (0.127291)
	tra (0.123092)