Non-Coding RNA Search

Ss1.1-rsug28_k9.5

Sequence:


               
               GTAGCAACCCTAAATTCCAAACAATGAAACTTTTATCTTACATAACATTTGTGCCAGTTC
TTTCTAAAGTCAAAGTCATGCTGTTATGTAACTGTAAGTATAAACCCAGTAAATAGAGAA
TGAGTTCTAGATAGTTCTACTCTGTAGAAACCCATAACTAAAATTTTTCACAACTCAAAT
ACAGAGTTCTTTTTTTAAAGTGTTAGCATTAGTGGTATAATCAGGAAGATCAGTTTCACT
TTATGCAGTGTTATGCAACTTCCCACCCCACCCCTACCACCATTTCCCAGCACAAGCCTG
TTTTCAGTCTTGATAAACCCTGTAGCTCCAGGTTACCTTCAGGTAAAGTTCACTAGCCCA
CCGGAGTATATCACTGGTTGAAAATTTTGTGGGTGAAAGAGGAACTAGAATTATGGAAAC
GATTATCTCTTGGTTCTCACTTTAGCCTTTGAGAGAAAGGAAATAAATATTCAGTTGGGC
ATGGCATTCTTTTTAAGTATTTAATTAAAATCTCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTAGCAACCCTAAATTCCAAACAATGAAACTTTTATCTTACATAACATTTGTGCCAGTTC
TTTCTAAAGTCAAAGTCATGCTGTTATGTAACTGTAAGTATAAACCCAGTAAATAGAGAA
TGAGTTCTAGATAGTTCTACTCTGTAGAAACCCATAACTAAAATTTTTCACAACTCAAAT
ACAGAGTTCTTTTTTTAAAGTGTTAGCATTAGTGGTATAATCAGGAAGATCAGTTTCACT
TTATGCAGTGTTATGCAACTTCCCACCCCACCCCTACCACCATTTCCCAGCACAAGCCTG
TTTTCAGTCTTGATAAACCCTGTAGCTCCAGGTTACCTTCAGGTAAAGTTCACTAGCCCA
CCGGAGTATATCACTGGTTGAAAATTTTGTGGGTGAAAGAGGAACTAGAATTATGGAAAC
GATTATCTCTTGGTTCTCACTTTAGCCTTTGAGAGAAAGGAAATAAATATTCAGTTGGGC
ATGGCATTCTTTTTAAGTATTTAATTAAAATCTCAG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-516, gnl|bosTau2|chr7 (18676599-18676082)
               

               
               1-516, gnl|Hg17|chr5 (130790100-130789632)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-516, gnl|bosTau2|chr7 (18676599-18676082)
               

               
               1-516, gnl|Hg17|chr5 (130790100-130789632)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               rec (0.17307)
               

               
               sug (0.127291)
               

               
               pgl (0.118483)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               rec (0.17307)
               

               
               sug (0.127291)
               

               
               pgl (0.118483)

	1-516, gnl\|bosTau2\|chr7 (18676599-18676082)
	1-516, gnl\|Hg17\|chr5 (130790100-130789632)