Ss1.1-rsug29_j6.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGCTCACAGTGCGCTATGTGTGTCTGCGGCGCTGTCTCAGCGTACTAATCAACGGCTGCA GAAACCTGACACCCTGTACCAGCAGTGGAGCTGATCCCTACGTCCGTGTCTACTTGTTGC CAGAAAGGAGGTGGGCAAGTCGTAAGAAGACCTCAGTGAAGCGGAAGACCCTGGAGCCCC TATTTGATGAGACATTTGAATTTTTTGTTCCCATGGATGAAGTAAAGAAGAGGTCACTAG ACGTTGCAGTGAAAAACAGCAGGCCACTTGGCTCACACAGAAGGAAGGAGCTAGGAAAAG TACTGATTGATTTATCAAAAGAAGATCTGATTAAGGGCTTCTCACAGTGGTATGAACTGA CTCCAGATGGACAGCCCAGGAGTTGATGATGAACAACATTATCATCTTTATTTTAAAATG TGTACATATGTATATTTTGTACTTTAAATCAGAACAGCCATTTGAAAAAAAATTTATATA TACACATTATTGTGTACAGTATAACTGCATGACTGGATACTATTAGGAGGAGCAGTAAAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGCTCACAGTGCGCTATGTGTGTCTGCGGCGCTGTCTCAGCGTACTAATCAACGGCTGCA GAAACCTGACACCCTGTACCAGCAGTGGAGCTGATCCCTACGTCCGTGTCTACTTGTTGC CAGAAAGGAGGTGGGCAAGTCGTAAGAAGACCTCAGTGAAGCGGAAGACCCTGGAGCCCC TATTTGATGAGACATTTGAATTTTTTGTTCCCATGGATGAAGTAAAGAAGAGGTCACTAG ACGTTGCAGTGAAAAACAGCAGGCCACTTGGCTCACACAGAAGGAAGGAGCTAGGAAAAG TACTGATTGATTTATCAAAAGAAGATCTGATTAAGGGCTTCTCACAGTGGTATGAACTGA CTCCAGATGGACAGCCCAGGAGTTGATGATGAACAACATTATCATCTTTATTTTAAAATG TGTACATATGTATATTTTGTACTTTAAATCAGAACAGCCATTTGAAAAAAAATTTATATA TACACATTATTGTGTACAGTATAACTGCATGACTGGATACTATTAGGAGGAGCAGTAAAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 59-193, gnl|bosTau2|chr1 (81929186-81929052) | |
| 59-193, gnl|canFam2|chr23 (37738941-37739100) | |
| 59-193, gnl|danRer3|chr16 (20425510-20425651) | |
| 59-193, gnl|dasNov1|scaffold_57458 (6172-6014) | |
| 59-193, gnl|echTel1|scaffold_229811 (685-837) | |
| 59-193, gnl|fr1|chrUn (134940055-134939894) | |
| 59-193, gnl|galGal2|chr7 (28978511-28978362) | |
| 59-193, gnl|hg17|chr3 (139675758-139675916) | |
| 59-193, gnl|Hg17|chr3 (139675758-139675892) | |
| 59-193, gnl|loxAfr1|scaffold_20448 (12641-12483) | |
| 59-193, gnl|mm7|chr9 (98958369-98958211) | |
| 59-193, gnl|Mm7|chr9 (98958367-98958233) | |
| 59-193, gnl|monDom2|scaffold_24 (33768840-33768984) | |
| 59-193, gnl|oryCun1|scaffold_195295 (11073-11231) | |
| 59-193, gnl|panTro1|chr2 (141940876-141941034) | |
| 59-193, gnl|rheMac2|chr2 (149343652-149343494) | |
| 59-193, gnl|rn3|chr8 (104194205-104194047) | |
| 59-193, gnl|tetNig1|chr6 (4224445-4224305) | |
| 194-302, gnl|bosTau2|chr1 (81923890-81923782) | |
| 194-302, gnl|canFam2|chr23 (37745349-37745454) | |
| 194-302, gnl|danRer3|chr16 (20425717-20425806) | |
| 194-302, gnl|dasNov1|scaffold_57458 (4451-4353) | |
| 194-302, gnl|echTel1|scaffold_97782 (468-565) | |
| 194-302, gnl|fr1|chrUn (26828601-26828518) | |
| 194-302, gnl|galGal2|chr7 (28977143-28977047) | |
| 194-302, gnl|hg17|chr3 (139677740-139677833) | |
| 194-302, gnl|Hg17|chr3 (139677763-139677871) | |
| 194-302, gnl|loxAfr1|scaffold_20448 (7358-7265) | |
| 194-302, gnl|mm7|chr9 (98956907-98956811) | |
| 194-302, gnl|Mm7|chr9 (98956879-98956771) | |
| 194-302, gnl|monDom2|scaffold_24 (33771180-33771265) | |
| 194-302, gnl|oryCun1|scaffold_195295 (12302-12399) | |
| 194-302, gnl|panTro1|chr2 (141942858-141942951) | |
| 194-302, gnl|rheMac2|chr2 (149341702-149341605) | |
| 194-302, gnl|rn3|chr8 (104192777-104192681) | |
| 194-302, gnl|tetNig1|chr6 (4224248-4224172) | |
| 349-477, gnl|bosTau2|chr1 (81922571-81922448) | |
| 349-477, gnl|Hg17|chr3 (139678357-139678485) | |
| 349-477, gnl|Mm7|chr9 (98953265-98953154) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 59-193, gnl|bosTau2|chr1 (81929186-81929052) | |
| 59-193, gnl|canFam2|chr23 (37738941-37739100) | |
| 59-193, gnl|danRer3|chr16 (20425510-20425651) | |
| 59-193, gnl|dasNov1|scaffold_57458 (6172-6014) | |
| 59-193, gnl|echTel1|scaffold_229811 (685-837) | |
| 59-193, gnl|fr1|chrUn (134940055-134939894) | |
| 59-193, gnl|galGal2|chr7 (28978511-28978362) | |
| 59-193, gnl|hg17|chr3 (139675758-139675916) | |
| 59-193, gnl|Hg17|chr3 (139675758-139675892) | |
| 59-193, gnl|loxAfr1|scaffold_20448 (12641-12483) | |
| 59-193, gnl|mm7|chr9 (98958369-98958211) | |
| 59-193, gnl|Mm7|chr9 (98958367-98958233) | |
| 59-193, gnl|monDom2|scaffold_24 (33768840-33768984) | |
| 59-193, gnl|oryCun1|scaffold_195295 (11073-11231) | |
| 59-193, gnl|panTro1|chr2 (141940876-141941034) | |
| 59-193, gnl|rheMac2|chr2 (149343652-149343494) | |
| 59-193, gnl|rn3|chr8 (104194205-104194047) | |
| 59-193, gnl|tetNig1|chr6 (4224445-4224305) | |
| 194-302, gnl|bosTau2|chr1 (81923890-81923782) | |
| 194-302, gnl|canFam2|chr23 (37745349-37745454) | |
| 194-302, gnl|danRer3|chr16 (20425717-20425806) | |
| 194-302, gnl|dasNov1|scaffold_57458 (4451-4353) | |
| 194-302, gnl|echTel1|scaffold_97782 (468-565) | |
| 194-302, gnl|fr1|chrUn (26828601-26828518) | |
| 194-302, gnl|galGal2|chr7 (28977143-28977047) | |
| 194-302, gnl|hg17|chr3 (139677740-139677833) | |
| 194-302, gnl|Hg17|chr3 (139677763-139677871) | |
| 194-302, gnl|loxAfr1|scaffold_20448 (7358-7265) | |
| 194-302, gnl|mm7|chr9 (98956907-98956811) | |
| 194-302, gnl|Mm7|chr9 (98956879-98956771) | |
| 194-302, gnl|monDom2|scaffold_24 (33771180-33771265) | |
| 194-302, gnl|oryCun1|scaffold_195295 (12302-12399) | |
| 194-302, gnl|panTro1|chr2 (141942858-141942951) | |
| 194-302, gnl|rheMac2|chr2 (149341702-149341605) | |
| 194-302, gnl|rn3|chr8 (104192777-104192681) | |
| 194-302, gnl|tetNig1|chr6 (4224248-4224172) | |
| 349-477, gnl|bosTau2|chr1 (81922571-81922448) | |
| 349-477, gnl|Hg17|chr3 (139678357-139678485) | |
| 349-477, gnl|Mm7|chr9 (98953265-98953154) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| cte (0.29274) | |
| mgm (0.180343) | |
| hyp (0.142837) | |
| csk (0.140746) | |
| sug (0.127291) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cte (0.29274) | |
| mgm (0.180343) | |
| hyp (0.142837) | |
| csk (0.140746) | |
| sug (0.127291) |