Ss1.1-rsug30_j18.5
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ACTTCTCCGGGCAGAGGAACATCTGCACGCTGTCCACGATCCAGAAATTGCCCAGGCTCT
TGGTCGCATCCTCCGATGGACACCTGTACATCTACAATTTGGACCCTCAGGACGGAGGAG
ACTGTGTCCTAATCAAGACCCACAGCTTGCTTGGCTCAGGAACCACCGAAGAGAATAAAG
AAAATGACCTCAAACCTTCATTACCTCAGTCTTACGCCGCCACTGTAGCCAGACCAAGCC
CGTCTTCGGCCTCCACGGTGCCAGGTTATTCCGAGGACGGCGGGGCGCTCCGAGGAGAGG
TTATTCCCGAACACGAGTTTGCGACGGGACCAGTGTGTCTTGATGATGAGAATGAATTCC
CCCCTATAATCTTGTGCCGCGGAAATCAGAAGGGCAAAACGAAGCAGTCATGATGAGCAG
CGCGCCTCAGAAATCAGGACCTCCCTGTCAGGTGGTTTTGGAGGAAACCAGGAAGGTGGA
AGAAAGGCGTGCGGTTGTGTGAGCGGAACGGGGGCAGGAACCCCAGGCGCCGCCTGCTTA
AGCCCCGGGACGGGACGCGGTCCGCTGTCCAGCAAGCTCTTCTCAGCCCCGGTCGCCGGT
GGGGACAGGTGACGTGGTGTATCTACGTCCCACTATTGAAAGTGTGTTACAGCCACAGCG
TCGACGCGAACTAACCATATTGGTCTCTAACCCGAAGTTTATATTTCAAAGGGCATCCTT
TTTAAAATGTATGCTGTGTAAAAATGTACTTACAGGAAGACCTCTTCGAACTGTATTTCT
TGTATATGACATACATAGAGAGACTGTTTTAGCCAAGCAAAATATTTTTGCAGTGATTGA
GAATAAATCATTTATTACCTTTCAGTCCCACTTAGGACACTAATAATAAAACCATGGCAA
TGCAAAAAAAAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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ACTTCTCCGGGCAGAGGAACATCTGCACGCTGTCCACGATCCAGAAATTGCCCAGGCTCT
TGGTCGCATCCTCCGATGGACACCTGTACATCTACAATTTGGACCCTCAGGACGGAGGAG
ACTGTGTCCTAATCAAGACCCACAGCTTGCTTGGCTCAGGAACCACCGAAGAGAATAAAG
AAAATGACCTCAAACCTTCATTACCTCAGTCTTACGCCGCCACTGTAGCCAGACCAAGCC
CGTCTTCGGCCTCCACGGTGCCAGGTTATTCCGAGGACGGCGGGGCGCTCCGAGGAGAGG
TTATTCCCGAACACGAGTTTGCGACGGGACCAGTGTGTCTTGATGATGAGAATGAATTCC
CCCCTATAATCTTGTGCCGCGGAAATCAGAAGGGCAAAACGAAGCAGTCATGATGAGCAG
CGCGCCTCAGAAATCAGGACCTCCCTGTCAGGTGGTTTTGGAGGAAACCAGGAAGGTGGA
AGAAAGGCGTGCGGTTGTGTGAGCGGAACGGGGGCAGGAACCCCAGGCGCCGCCTGCTTA
AGCCCCGGGACGGGACGCGGTCCGCTGTCCAGCAAGCTCTTCTCAGCCCCGGTCGCCGGT
GGGGACAGGTGACGTGGTGTATCTACGTCCCACTATTGAAAGTGTGTTACAGCCACAGCG
TCGACGCGAACTAACCATATTGGTCTCTAACCCGAAGTTTATATTTCAAAGGGCATCCTT
TTTAAAATGTATGCTGTGTAAAAATGTACTTACAGGAAGACCTCTTCGAACTGTATTTCT
TGTATATGACATACATAGAGAGACTGTTTTAGCCAAGCAAAATATTTTTGCAGTGATTGA
GAATAAATCATTTATTACCTTTCAGTCCCACTTAGGACACTAATAATAAAACCATGGCAA
TGCAAAAAAAAA
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144-266, gnl|bosTau2|chr19 (56323299-56323421) |
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144-266, gnl|canFam2|chr9 (18247820-18247914) |
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144-266, gnl|echTel1|scaffold_308186 (6949-7043) |
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144-266, gnl|galGal2|chr18 (7624274-7624360) |
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144-266, gnl|hg17|chr17 (63934854-63934950) |
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144-266, gnl|Hg17|chr17 (63934991-63934869) |
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144-266, gnl|loxAfr1|scaffold_50710 (10049-10145) |
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144-266, gnl|mm7|chr11 (109686612-109686695) |
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144-266, gnl|Mm7|chr11 (109686736-109686614) |
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144-266, gnl|monDom2|scaffold_18 (21391369-21391455) |
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144-266, gnl|oryCun1|scaffold_198829 (144950-144858) |
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144-266, gnl|panTro1|chr19 (67234962-67235058) |
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144-266, gnl|rheMac2|chr16 (63695570-63695666) |
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144-266, gnl|rn3|chr10 (98764195-98764112) |
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144-266, gnl|xenTro1|scaffold_4229 (10083-9997) |
| |
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581-904, gnl|bosTau2|chr19 (56326853-56327173) |
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581-904, gnl|Hg17|chr17 (63929374-63929017) |
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581-904, gnl|Mm7|chr11 (109682827-109682372) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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144-266, gnl|bosTau2|chr19 (56323299-56323421) |
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144-266, gnl|canFam2|chr9 (18247820-18247914) |
|
144-266, gnl|echTel1|scaffold_308186 (6949-7043) |
|
144-266, gnl|galGal2|chr18 (7624274-7624360) |
|
144-266, gnl|hg17|chr17 (63934854-63934950) |
|
144-266, gnl|Hg17|chr17 (63934991-63934869) |
|
144-266, gnl|loxAfr1|scaffold_50710 (10049-10145) |
|
144-266, gnl|mm7|chr11 (109686612-109686695) |
|
144-266, gnl|Mm7|chr11 (109686736-109686614) |
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144-266, gnl|monDom2|scaffold_18 (21391369-21391455) |
|
144-266, gnl|oryCun1|scaffold_198829 (144950-144858) |
|
144-266, gnl|panTro1|chr19 (67234962-67235058) |
|
144-266, gnl|rheMac2|chr16 (63695570-63695666) |
|
144-266, gnl|rn3|chr10 (98764195-98764112) |
|
144-266, gnl|xenTro1|scaffold_4229 (10083-9997) |
| |
|
581-904, gnl|bosTau2|chr19 (56326853-56327173) |
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581-904, gnl|Hg17|chr17 (63929374-63929017) |
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581-904, gnl|Mm7|chr11 (109682827-109682372) |
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tes (0.207814) |
|
col (0.195008) |
|
sto (0.179824) |
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cje (0.165235) |
|
spl (0.143184) |
|
hyp (0.142837) |
|
pty (0.142714) |
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ssp (0.13552) |
|
sug (0.127291) |
|
bla (0.124347) |
|
jca (0.11396) |
|
nbm (0.0993246) |
|
jej (0.0989218) |
|
tes (0.207814) |
|
col (0.195008) |
|
sto (0.179824) |
|
cje (0.165235) |
|
spl (0.143184) |
|
hyp (0.142837) |
|
pty (0.142714) |
|
ssp (0.13552) |
|
sug (0.127291) |
|
bla (0.124347) |
|
jca (0.11396) |
|
nbm (0.0993246) |
|
jej (0.0989218) |
