Non-Coding RNA Search

Ss1.1-rsug30_p21.5

Sequence:


               
               GACATTGTGGTGACATTGGTGACTCTGTCTAGCTGTCGTTAGTCTTTGGGGGAGACTGTT
AGGAACAGTATGTACAGTATATACCTGCTAACTGAGTTCATGATGACAGTTGCATTTGCT
GATGCTTACTGAGGCTCTGTTACCTGCTCTTTGCTTCTCTCACTCCATAGCCTTCTTAAT
CCTCCAGGTATGACAGTGGTACAGCGTTCTGCTTTTTTACATCACCTCTCTGCTCAGTGG
TTTTGAGGCATAAACAACGCGTATTGCCATGCACTTTTGGCATTTGTGCTGGACTGAGAG
AACCCCAAACGAATCACTCCAATTAAATTTCAAAGATAGTTGCAGAAAGCACAGGGCAAG
ACACGTGCAGTGCCTTCGACGATCTGCATTCCATGACGTACTTCCTTCTGTATCCTTAGG
TACAGTCGACTCGGAGTCCTGGTGATTGTCATTGTCGGAAAAAAAGCATTGTTTAAAAAG
TAGAGCGAATGAAAACTGCAATGCTGAAAAAAGGAACTGTGAAACTAAAATTAAGAAGAC
AGTTTATTTTAAGGAGCATTTCTGCCATACATACAAAAACAAAAGCTTTATCACCAATTG
GAGCTTGTGATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACATTGTGGTGACATTGGTGACTCTGTCTAGCTGTCGTTAGTCTTTGGGGGAGACTGTT
AGGAACAGTATGTACAGTATATACCTGCTAACTGAGTTCATGATGACAGTTGCATTTGCT
GATGCTTACTGAGGCTCTGTTACCTGCTCTTTGCTTCTCTCACTCCATAGCCTTCTTAAT
CCTCCAGGTATGACAGTGGTACAGCGTTCTGCTTTTTTACATCACCTCTCTGCTCAGTGG
TTTTGAGGCATAAACAACGCGTATTGCCATGCACTTTTGGCATTTGTGCTGGACTGAGAG
AACCCCAAACGAATCACTCCAATTAAATTTCAAAGATAGTTGCAGAAAGCACAGGGCAAG
ACACGTGCAGTGCCTTCGACGATCTGCATTCCATGACGTACTTCCTTCTGTATCCTTAGG
TACAGTCGACTCGGAGTCCTGGTGATTGTCATTGTCGGAAAAAAAGCATTGTTTAAAAAG
TAGAGCGAATGAAAACTGCAATGCTGAAAAAAGGAACTGTGAAACTAAAATTAAGAAGAC
AGTTTATTTTAAGGAGCATTTCTGCCATACATACAAAAACAAAAGCTTTATCACCAATTG
GAGCTTGTGATG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-612, gnl|bosTau2|chr4 (19277194-19276577)
               

               
               1-612, gnl|Hg17|chr7 (107383838-107383234)
               

               
               1-612, gnl|Mm7|chr12 (42567039-42567617)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-612, gnl|bosTau2|chr4 (19277194-19276577)
               

               
               1-612, gnl|Hg17|chr7 (107383838-107383234)
               

               
               1-612, gnl|Mm7|chr12 (42567039-42567617)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               sug (0.254582)
               

               
               fhi (0.169578)
               

               
               spc (0.113366)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sug (0.254582)
               

               
               fhi (0.169578)
               

               
               spc (0.113366)

	1-612, gnl\|bosTau2\|chr4 (19277194-19276577)
	1-612, gnl\|Hg17\|chr7 (107383838-107383234)
	1-612, gnl\|Mm7\|chr12 (42567039-42567617)