Non-Coding RNA Search

Ss1.1-rtes01_f13.5

Sequence:


               
               GCAAAGTCACCCTTTTAAAATAAAAATTTAAAAAAAAAAAAAAAAAACAAAAAAAAAAGA
GCTAATATGGAAACCACATGTAACCTAGCCAGACTATATCGTGTAGCTTCAAGAACCTGC
AGTACATTACCAGCTGTGATTCTCCTGAAAATTCAAGGGAACTGAAAGCCAAAAGAAGAA
AAGAAAGGAACAGTCAAGAGTCCTGTTAAGAAGTTGGTTTGAATACGTAATTACTGTAGT
TTGGATTAACTCCCCTCCTGCTTATTTCCATCCCAAACTGCATTTATAATTTTGTGACTG
AGGATCATTTGTTTGTTAATGTACTGTGACTTTAACTTTAGACAACTTATTATTTTGATG
TCCTGTTGGCTCAGTAAAGCTCAAATTATCAGTTGTTTTGACAAAATAAATTTACAGAAT
TTGGGCCAAAATCAAACCTTGGTGCCAGGTTAACTTAACAACTTAACAGGAATCATCAAT
TCATTCATAAATATAAGGGGAAAAAACTTGGGTGGTAGCCTGCATTAGGACTTTCTGTTA
TTTGCAAATTGGGAGAAAAACATCTTTGGGCAGAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAAAGTCACCCTTTTAAAATAAAAATTTAAAAAAAAAAAAAAAAAACAAAAAAAAAAGA
GCTAATATGGAAACCACATGTAACCTAGCCAGACTATATCGTGTAGCTTCAAGAACCTGC
AGTACATTACCAGCTGTGATTCTCCTGAAAATTCAAGGGAACTGAAAGCCAAAAGAAGAA
AAGAAAGGAACAGTCAAGAGTCCTGTTAAGAAGTTGGTTTGAATACGTAATTACTGTAGT
TTGGATTAACTCCCCTCCTGCTTATTTCCATCCCAAACTGCATTTATAATTTTGTGACTG
AGGATCATTTGTTTGTTAATGTACTGTGACTTTAACTTTAGACAACTTATTATTTTGATG
TCCTGTTGGCTCAGTAAAGCTCAAATTATCAGTTGTTTTGACAAAATAAATTTACAGAAT
TTGGGCCAAAATCAAACCTTGGTGCCAGGTTAACTTAACAACTTAACAGGAATCATCAAT
TCATTCATAAATATAAGGGGAAAAAACTTGGGTGGTAGCCTGCATTAGGACTTTCTGTTA
TTTGCAAATTGGGAGAAAAACATCTTTGGGCAGAAT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               55-562, gnl|bosTau2|chrX (28779816-28780322)
               

               
               55-562, gnl|Hg17|chrX (40963254-40963767)
               

               
               55-562, gnl|Mm7|chrX (11724670-11725184)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               55-562, gnl|bosTau2|chrX (28779816-28780322)
               

               
               55-562, gnl|Hg17|chrX (40963254-40963767)
               

               
               55-562, gnl|Mm7|chrX (11724670-11725184)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               tes (0.415628)
               

               
               fty (0.17584)
               

               
               sin (0.174948)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.415628)
               

               
               fty (0.17584)
               

               
               sin (0.174948)

	55-562, gnl\|bosTau2\|chrX (28779816-28780322)
	55-562, gnl\|Hg17\|chrX (40963254-40963767)
	55-562, gnl\|Mm7\|chrX (11724670-11725184)