Non-Coding RNA Search

Ss1.1-rtes02_a11.5

Sequence:


               
               TCTTCAAATTAAGTACATATGTGTACTGGAGCAGAAAATGTAAGGGATCTATTCAAATCT
CAAGAGTTGTCATTTTTAAACTTCTTTTAAGATACTTTTACGTGGCTAGAAAAATTTTGT
GATTCAAAAATCATTAATAAAATTAATGCATCTTAGTGTATAGTCAAAGAGGCTTGGACA
TACTTTCAGGGGTTAGTAAGTATATTCCTCTGGATAAACTTCAAAAAATTACCCACTCAA
AGATTTGAAGTTTTAAACTGGCCACCCACTAGTACACTGAGTGACACTATAGAATTCCTT
ACCTAGAAAGTAATTTTCCAGGTGAAAAACTTAGAGCCAACAAAGATAGACTCATAACAG
GGACAAGGAGGATGGATAATTTTCAACCAATATTGAAGCATCGCTCTCACAGTTCAAAAT
CCCAACTTAACTCTCAAGCTAAAAATGGGTGAAATTTTATCTGAATATATAGTATTTATA
TTCCTTAGGTCTGTTTGTTAAGCCGCTAAAATCTCATTAAAATCATGATCAAAAATAGTA
ATGTTGATTTTGTTTCTATTAAATACAATTTTTTAAAGAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTTCAAATTAAGTACATATGTGTACTGGAGCAGAAAATGTAAGGGATCTATTCAAATCT
CAAGAGTTGTCATTTTTAAACTTCTTTTAAGATACTTTTACGTGGCTAGAAAAATTTTGT
GATTCAAAAATCATTAATAAAATTAATGCATCTTAGTGTATAGTCAAAGAGGCTTGGACA
TACTTTCAGGGGTTAGTAAGTATATTCCTCTGGATAAACTTCAAAAAATTACCCACTCAA
AGATTTGAAGTTTTAAACTGGCCACCCACTAGTACACTGAGTGACACTATAGAATTCCTT
ACCTAGAAAGTAATTTTCCAGGTGAAAAACTTAGAGCCAACAAAGATAGACTCATAACAG
GGACAAGGAGGATGGATAATTTTCAACCAATATTGAAGCATCGCTCTCACAGTTCAAAAT
CCCAACTTAACTCTCAAGCTAAAAATGGGTGAAATTTTATCTGAATATATAGTATTTATA
TTCCTTAGGTCTGTTTGTTAAGCCGCTAAAATCTCATTAAAATCATGATCAAAAATAGTA
ATGTTGATTTTGTTTCTATTAAATACAATTTTTTAAAGAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               3-580, gnl|bosTau2|chr21 (29670484-29671057)
               

               
               3-580, gnl|Hg17|chr14 (34415287-34416489)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-580, gnl|bosTau2|chr21 (29670484-29671057)
               

               
               3-580, gnl|Hg17|chr14 (34415287-34416489)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               tes (0.415628)
               

               
               mga (0.160205)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.415628)
               

               
               mga (0.160205)

	3-580, gnl\|bosTau2\|chr21 (29670484-29671057)
	3-580, gnl\|Hg17\|chr14 (34415287-34416489)