Non-Coding RNA Search

Ss1.1-rtes02_a19.5

Sequence:


               
               TTGAGAAGTCAGACTTCAAGGGACTGTGTGGACAGGAATCTTGAAGATGTCAGAAGAAGT
CAGAGAAATAAGGACTTGACCCTTTTCTTCAGGGTTCCTCGTCAATCTTCCAAACACTGT
AGGGGAAAAAGGCTGGAATCAAGTCTGAGAGACCATGTATATCCAACCCTGAATGACATG
TGCTTTGAGATATATGTAAACTGATGAGAAGAAAATACTGTTTTTGGCTCTGATGTCACT
GGCTCTGAGTTCACCAGACATTTTTTTTTATAGGACTTTGTTTCCCTTCAATATTTCTCC
AACATGCTGCCTCTGTTCATATAGATTTCTGAGTTTTGTGCCTCCAAGAAAAGATTGATT
GGACTGCTGCATTCCTTTTGTGAGGATTAGGACTTTGGGGACCAGGAGCTGAATTCTTAA
GGGCTGTGGTTATATTAATAGGTTTGCACCCCTATGTGTGAAAAAGTCACTTCCCAGTTG
GGGCTAAGAATAGATCACCCACTTTTGTAGCTTCCTGAGGTTTCCTCTACCACATTATTG
AACATCAGCTCTCCCCTTCTATAGCAGCTCCACCTGTAATTGCTTTTCTATGCTTAGAAC
AGGTAATCCATTTTTAGTTGCACTATTAAAAACAACACCATCGGTTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGAGAAGTCAGACTTCAAGGGACTGTGTGGACAGGAATCTTGAAGATGTCAGAAGAAGT
CAGAGAAATAAGGACTTGACCCTTTTCTTCAGGGTTCCTCGTCAATCTTCCAAACACTGT
AGGGGAAAAAGGCTGGAATCAAGTCTGAGAGACCATGTATATCCAACCCTGAATGACATG
TGCTTTGAGATATATGTAAACTGATGAGAAGAAAATACTGTTTTTGGCTCTGATGTCACT
GGCTCTGAGTTCACCAGACATTTTTTTTTATAGGACTTTGTTTCCCTTCAATATTTCTCC
AACATGCTGCCTCTGTTCATATAGATTTCTGAGTTTTGTGCCTCCAAGAAAAGATTGATT
GGACTGCTGCATTCCTTTTGTGAGGATTAGGACTTTGGGGACCAGGAGCTGAATTCTTAA
GGGCTGTGGTTATATTAATAGGTTTGCACCCCTATGTGTGAAAAAGTCACTTCCCAGTTG
GGGCTAAGAATAGATCACCCACTTTTGTAGCTTCCTGAGGTTTCCTCTACCACATTATTG
AACATCAGCTCTCCCCTTCTATAGCAGCTCCACCTGTAATTGCTTTTCTATGCTTAGAAC
AGGTAATCCATTTTTAGTTGCACTATTAAAAACAACACCATCGGTTAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               112-647, gnl|bosTau2|chr10 (43103025-43103560)
               

               
               112-647, gnl|Hg17|chr15 (46179998-46179473)
               

               
               112-647, gnl|Mm7|chr2 (124789880-124789415)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               112-647, gnl|bosTau2|chr10 (43103025-43103560)
               

               
               112-647, gnl|Hg17|chr15 (46179998-46179473)
               

               
               112-647, gnl|Mm7|chr2 (124789880-124789415)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tes (0.207814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	112-647, gnl\|bosTau2\|chr10 (43103025-43103560)
	112-647, gnl\|Hg17\|chr15 (46179998-46179473)
	112-647, gnl\|Mm7\|chr2 (124789880-124789415)