Ss1.1-rtes02_k16.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGGACAAAACCATCAGATTGTGGGACAGTCGGGGGCTGCAGATAGCTCATACATTTCCC ACAAAGCAGCACATCCAGACCTACTGCGAGGTCAGTGAGGATGGACACAGGTGTATCTCT TGCAGCAGCGGCTTTGGAGGGGAAGGCTGCGAAGCCACGTTGTGGGACCTGAGGCAGACG CGGAACAGAATCTGTGAGTATAAAGGCCATTTCCAGACTGTTGCATCCTGTGTCTTTCTA CCAAGAGCATTAGCCTCCATGCCTGTAATTGCTACCTCATCACATGACTGCAAGGTGAAG ATCTGGAACGAAGATACTGGAGTCTGCCTTTTCACCTTGTCTCTGGATGGATCGGGACCT TTGACTTCCCTGGCTGTTGCCGACACCATCTCCTTACTGTGTGCAAGTTTCAGCAGAGGA ATTCACTTACTCAGGGTGGACCACAGCCGAGGGCTGGAACTGCGGGAAGTAGCAGCATTC TGAGACTAAGAGACTGTCACTGGACAATAGCAAATGCTGGCCCCTCCTTTCTCAGTGTGA CTTTGTGTTTGTTCATGTCATCTTGGGGGAGGATGATGTGGGGTTAGTGTTCTTTGCTTA GGTTCTTTTAGAAGGTACATCACTGTTAAAAGTCAGTTGAAGTCCAGTGGTTCAAAATCA GGTGCAGAGATGAGAAACACGGAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGGACAAAACCATCAGATTGTGGGACAGTCGGGGGCTGCAGATAGCTCATACATTTCCC ACAAAGCAGCACATCCAGACCTACTGCGAGGTCAGTGAGGATGGACACAGGTGTATCTCT TGCAGCAGCGGCTTTGGAGGGGAAGGCTGCGAAGCCACGTTGTGGGACCTGAGGCAGACG CGGAACAGAATCTGTGAGTATAAAGGCCATTTCCAGACTGTTGCATCCTGTGTCTTTCTA CCAAGAGCATTAGCCTCCATGCCTGTAATTGCTACCTCATCACATGACTGCAAGGTGAAG ATCTGGAACGAAGATACTGGAGTCTGCCTTTTCACCTTGTCTCTGGATGGATCGGGACCT TTGACTTCCCTGGCTGTTGCCGACACCATCTCCTTACTGTGTGCAAGTTTCAGCAGAGGA ATTCACTTACTCAGGGTGGACCACAGCCGAGGGCTGGAACTGCGGGAAGTAGCAGCATTC TGAGACTAAGAGACTGTCACTGGACAATAGCAAATGCTGGCCCCTCCTTTCTCAGTGTGA CTTTGTGTTTGTTCATGTCATCTTGGGGGAGGATGATGTGGGGTTAGTGTTCTTTGCTTA GGTTCTTTTAGAAGGTACATCACTGTTAAAAGTCAGTTGAAGTCCAGTGGTTCAAAATCA GGTGCAGAGATGAGAAACACGGAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 14-162, gnl|bosTau2|chr8 (52935411-52935559) | |
| 14-162, gnl|canFam2|chr11 (70714397-70714594) | |
| 14-162, gnl|danRer3|chr5 (2510790-2510946) | |
| 14-162, gnl|dasNov1|scaffold_16250 (8242-8102) | |
| 14-162, gnl|echTel1|scaffold_298291 (35186-35378) | |
| 14-162, gnl|fr1|chrUn (238594000-238593810) | |
| 14-162, gnl|galGal2|chr17 (9415003-9415195) | |
| 14-162, gnl|hg17|chr9 (113162161-113162359) | |
| 14-162, gnl|Hg17|chr9 (113162336-113162188) | |
| 14-162, gnl|mm7|chr4 (61891112-61891305) | |
| 14-162, gnl|Mm7|chr4 (61891281-61891133) | |
| 14-162, gnl|monDom2|scaffold_51 (1526608-1526431) | |
| 14-162, gnl|oryCun1|scaffold_134024 (7017-6825) | |
| 14-162, gnl|panTro1|chr11 (97698044-97698242) | |
| 14-162, gnl|rheMac2|chr15 (22799338-22799140) | |
| 14-162, gnl|rn3|chr5 (79451636-79451814) | |
| 14-162, gnl|tetNig1|chr12 (7211009-7210836) | |
| 14-162, gnl|xenTro1|scaffold_302 (621992-621827) | |
| 321-683, gnl|bosTau2|chr8 (52941251-52941605) | |
| 321-683, gnl|Hg17|chr9 (113158745-113158382) | |
| 321-683, gnl|Mm7|chr4 (61887635-61887310) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 14-162, gnl|bosTau2|chr8 (52935411-52935559) | |
| 14-162, gnl|canFam2|chr11 (70714397-70714594) | |
| 14-162, gnl|danRer3|chr5 (2510790-2510946) | |
| 14-162, gnl|dasNov1|scaffold_16250 (8242-8102) | |
| 14-162, gnl|echTel1|scaffold_298291 (35186-35378) | |
| 14-162, gnl|fr1|chrUn (238594000-238593810) | |
| 14-162, gnl|galGal2|chr17 (9415003-9415195) | |
| 14-162, gnl|hg17|chr9 (113162161-113162359) | |
| 14-162, gnl|Hg17|chr9 (113162336-113162188) | |
| 14-162, gnl|mm7|chr4 (61891112-61891305) | |
| 14-162, gnl|Mm7|chr4 (61891281-61891133) | |
| 14-162, gnl|monDom2|scaffold_51 (1526608-1526431) | |
| 14-162, gnl|oryCun1|scaffold_134024 (7017-6825) | |
| 14-162, gnl|panTro1|chr11 (97698044-97698242) | |
| 14-162, gnl|rheMac2|chr15 (22799338-22799140) | |
| 14-162, gnl|rn3|chr5 (79451636-79451814) | |
| 14-162, gnl|tetNig1|chr12 (7211009-7210836) | |
| 14-162, gnl|xenTro1|scaffold_302 (621992-621827) | |
| 321-683, gnl|bosTau2|chr8 (52941251-52941605) | |
| 321-683, gnl|Hg17|chr9 (113158745-113158382) | |
| 321-683, gnl|Mm7|chr4 (61887635-61887310) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (0.207814) | |
| mcp (0.170648) |