Non-Coding RNA Search

Ss1.1-rtes03_n15.5S

Sequence:


               
               GTCATTCCAGTTCCTTTATTAGCTTCGTTTCCAAAAACAAAAAGCTGGTATCACACTACA
CACTGTTTTTTGCTTGCTTCTGTTGTGAACCATCTCCTGCCTGTGTCAGTAAATAATTTT
CCACGAGATTTTACAACTGCCTGGTGTTCCATTATATGTATTATCATTGATTTAGCTGGT
TTCCCCATTCCTGGTGTTATGGTTGTTTCTATTTTGTATTAAGTAGAGCAGTGACAAGTA
TTTTTTTGCACATCTGAGTATTCCCCTGGAAAATTCTGCAAATGGTGGAGCTGGATTCAT
GGTCACCATTGGCAGGTACAACCAGAAAGCCCTCTCAGTTCCTGCTGTGGTTCATTGGAA
GCAAACCTGACTAGCATCCATGATGATGCAGGTTTGATCCTTGGCCTTGCTCATTGAGTT
AAAGACCCGGTGTTGCCGTGAGCTGTGGTGTATATCACAGATGCGACTCATATTCCATGT
TGCTGTGGCTGTGGCATATGTTGGCAGCTACAGCTCTGATTCGACTCCTATCCTGAGAAC
CTTCATATGCCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCATTCCAGTTCCTTTATTAGCTTCGTTTCCAAAAACAAAAAGCTGGTATCACACTACA
CACTGTTTTTTGCTTGCTTCTGTTGTGAACCATCTCCTGCCTGTGTCAGTAAATAATTTT
CCACGAGATTTTACAACTGCCTGGTGTTCCATTATATGTATTATCATTGATTTAGCTGGT
TTCCCCATTCCTGGTGTTATGGTTGTTTCTATTTTGTATTAAGTAGAGCAGTGACAAGTA
TTTTTTTGCACATCTGAGTATTCCCCTGGAAAATTCTGCAAATGGTGGAGCTGGATTCAT
GGTCACCATTGGCAGGTACAACCAGAAAGCCCTCTCAGTTCCTGCTGTGGTTCATTGGAA
GCAAACCTGACTAGCATCCATGATGATGCAGGTTTGATCCTTGGCCTTGCTCATTGAGTT
AAAGACCCGGTGTTGCCGTGAGCTGTGGTGTATATCACAGATGCGACTCATATTCCATGT
TGCTGTGGCTGTGGCATATGTTGGCAGCTACAGCTCTGATTCGACTCCTATCCTGAGAAC
CTTCATATGCCG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-335, gnl|bosTau2|chr13 (33738906-33738556)
               

               
               1-335, gnl|Hg17|chr20 (3686020-3685313)
               

               
               1-335, gnl|Mm7|chr2 (130891647-130891228)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-335, gnl|bosTau2|chr13 (33738906-33738556)
               

               
               1-335, gnl|Hg17|chr20 (3686020-3685313)
               

               
               1-335, gnl|Mm7|chr2 (130891647-130891228)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tes (0.207814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	1-335, gnl\|bosTau2\|chr13 (33738906-33738556)
	1-335, gnl\|Hg17\|chr20 (3686020-3685313)
	1-335, gnl\|Mm7\|chr2 (130891647-130891228)