Ss1.1-rtes07_e16.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTGACCTTATCCTTCCAAGACTGGCTGGCTAGTGTCACGGAACGCATCCATCAAACCATG CACTATCAGTTTGATGGCAAACCAGAGCCACTGGTGTTCCACATTCCTCAGTCCTTCTTT GATGCCCTGCAACAGAGAATATCCATAGGAAGTGCAAAAAAACGGCTTCCCAACTCCACC ACAGCTTTTGTGCGCAAAGACGCCTTGCCACTGGGAACCTTTTCTAAATATACCTGGCAT ATCACAAATATCCTGCAAGTTAAACAAATCTTAGATACTCCAGAGATGCCCTTGGAAATC ACCCGGAGTTTTATCCAGAACCGGGATGGGACTTATGAGCTGTTTAAATGCCCTAAAGTA GAAGTAGAGAGCATAGCAGAAACCTATGGCCGTATAGAAAAGCAACCAGTGCTGCGACCC TTGGAACTAAAAACTTTTCTCAAAGTTGGCAACACTTCCCCAGATCAAAAGGAGCCAACA CCTTTCATCATTGAGTGGATCCCAGATATTCTTCCCCAATCCAAGATTGGCGAGCTTCGG ATCAAGTTTGAGTACGGTCACCACCGGAATGGCCATGTGGCAGAATACCAAGACCAGCGG CCCCCCCTGGACCAGCCCTTGGAGCTTGCACCTCTGACCACCATTACTTTCCCTTGAGGC AAAACAAAAGAGGCTTTTGCTGCTAAATTTGCACATCCCAACCCTTTGACAACTTTAAAT ACTAGTCAGGCACTTAGATGGCCTTGTTCCTTAATGAACCACTCTTAGCTAAGACGCAGT TTCTCAACACAATCAATTGGATACTGTTGAAGAAAAACTCTTTTTGTAAATAGCCAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTGACCTTATCCTTCCAAGACTGGCTGGCTAGTGTCACGGAACGCATCCATCAAACCATG CACTATCAGTTTGATGGCAAACCAGAGCCACTGGTGTTCCACATTCCTCAGTCCTTCTTT GATGCCCTGCAACAGAGAATATCCATAGGAAGTGCAAAAAAACGGCTTCCCAACTCCACC ACAGCTTTTGTGCGCAAAGACGCCTTGCCACTGGGAACCTTTTCTAAATATACCTGGCAT ATCACAAATATCCTGCAAGTTAAACAAATCTTAGATACTCCAGAGATGCCCTTGGAAATC ACCCGGAGTTTTATCCAGAACCGGGATGGGACTTATGAGCTGTTTAAATGCCCTAAAGTA GAAGTAGAGAGCATAGCAGAAACCTATGGCCGTATAGAAAAGCAACCAGTGCTGCGACCC TTGGAACTAAAAACTTTTCTCAAAGTTGGCAACACTTCCCCAGATCAAAAGGAGCCAACA CCTTTCATCATTGAGTGGATCCCAGATATTCTTCCCCAATCCAAGATTGGCGAGCTTCGG ATCAAGTTTGAGTACGGTCACCACCGGAATGGCCATGTGGCAGAATACCAAGACCAGCGG CCCCCCCTGGACCAGCCCTTGGAGCTTGCACCTCTGACCACCATTACTTTCCCTTGAGGC AAAACAAAAGAGGCTTTTGCTGCTAAATTTGCACATCCCAACCCTTTGACAACTTTAAAT ACTAGTCAGGCACTTAGATGGCCTTGTTCCTTAATGAACCACTCTTAGCTAAGACGCAGT TTCTCAACACAATCAATTGGATACTGTTGAAGAAAAACTCTTTTTGTAAATAGCCAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 76-184, gnl|bosTau2|chr11 (49462235-49462127) | |
| 76-184, gnl|canFam2|chr10 (71896795-71896913) | |
| 76-184, gnl|danRer3|chr5 (63178136-63178249) | |
| 76-184, gnl|dasNov1|scaffold_9220 (84027-83909) | |
| 76-184, gnl|echTel1|scaffold_249611 (8343-8450) | |
| 76-184, gnl|fr1|chrUn (58635559-58635677) | |
| 76-184, gnl|galGal2|chrUn (141321665-141321547) | |
| 76-184, gnl|hg17|chr2 (70304309-70304427) | |
| 76-184, gnl|Hg17|chr2 (70304419-70304311) | |
| 76-184, gnl|loxAfr1|scaffold_24354 (33202-33084) | |
| 76-184, gnl|mm7|chr6 (86533013-86532895) | |
| 76-184, gnl|Mm7|chr6 (86532901-86533009) | |
| 76-184, gnl|monDom2|scaffold_1 (93723413-93723531) | |
| 76-184, gnl|oryCun1|scaffold_174788 (42157-42271) | |
| 76-184, gnl|panTro1|chr12 (72615623-72615741) | |
| 76-184, gnl|rheMac2|chr13 (70451791-70451909) | |
| 76-184, gnl|rn3|chr4 (120888974-120888856) | |
| 76-184, gnl|tetNig1|chrUn_random (1761951-1761834) | |
| 76-184, gnl|xenTro1|scaffold_110 (1713218-1713100) | |
| 448-835, gnl|bosTau2|chr11 (49451528-49451143) | |
| 448-835, gnl|Hg17|chr2 (70289348-70288961) | |
| 448-835, gnl|Mm7|chr6 (86544831-86545202) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 76-184, gnl|bosTau2|chr11 (49462235-49462127) | |
| 76-184, gnl|canFam2|chr10 (71896795-71896913) | |
| 76-184, gnl|danRer3|chr5 (63178136-63178249) | |
| 76-184, gnl|dasNov1|scaffold_9220 (84027-83909) | |
| 76-184, gnl|echTel1|scaffold_249611 (8343-8450) | |
| 76-184, gnl|fr1|chrUn (58635559-58635677) | |
| 76-184, gnl|galGal2|chrUn (141321665-141321547) | |
| 76-184, gnl|hg17|chr2 (70304309-70304427) | |
| 76-184, gnl|Hg17|chr2 (70304419-70304311) | |
| 76-184, gnl|loxAfr1|scaffold_24354 (33202-33084) | |
| 76-184, gnl|mm7|chr6 (86533013-86532895) | |
| 76-184, gnl|Mm7|chr6 (86532901-86533009) | |
| 76-184, gnl|monDom2|scaffold_1 (93723413-93723531) | |
| 76-184, gnl|oryCun1|scaffold_174788 (42157-42271) | |
| 76-184, gnl|panTro1|chr12 (72615623-72615741) | |
| 76-184, gnl|rheMac2|chr13 (70451791-70451909) | |
| 76-184, gnl|rn3|chr4 (120888974-120888856) | |
| 76-184, gnl|tetNig1|chrUn_random (1761951-1761834) | |
| 76-184, gnl|xenTro1|scaffold_110 (1713218-1713100) | |
| 448-835, gnl|bosTau2|chr11 (49451528-49451143) | |
| 448-835, gnl|Hg17|chr2 (70289348-70288961) | |
| 448-835, gnl|Mm7|chr6 (86544831-86545202) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (0.415628) | |
| fbs (0.175346) |