Ss1.1-rtes07_g23.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGGAACCGAATCCGTATCTCCATTGCCCTGTTGAAGGAGGGGAGCAAAGCCATTGGATA TATCCCTACTACATTAATTTATCCAGTTTTAACTTTCATTTTCCTCTCAATCTGCATTTC CTATTGGGCTGTGATAGCAGTTTACTTGGCTACATCGGGGGTACCCGTATACAAAGTCAT AACCCCAAAGGGGCAGTGTATACATGAAAATAAAACCTGTGACCCACAGACTTTTAATAC AACTGAAATTGCCAAAGCTTGCCCTGGGGCCCAGTGTAACTTTGCTTTTTATGGTGGAAA GAGCCTGTACCATCAATACATCACTACCTTCCAGATATTCAATCTATTTGTCTTTCTCTG GCTTATAAACTTTGTCATTGCACTGGGTCAGTGTGCCCTTGCTGGTGCCTTTGCTTCTTA TTATTGGGCCTTGAAAAAACCTGACGACATCCCTCCATATCCACTTTTTACTGCATTTGG ACGAGCCATAAGATATCACACAGGATCCCTAGCATTTGGATCTTTAATTCTTGCAGGAAT TCAAATGTTTAGATTAATCCTAGAATACTTGGACAAACGTCTCAAAGAGGCCCAGAACAA CATTTCTAAATTCCTAAAATGCTGCCTGAGATGCTGTTTCTGGTGTTTGGAAAAAGCGGT AAAGTTTTTGAACAGAAATGCCTATATTATGATTGCGATATACGGCAAAAACTTCTGCAG GTCAGCAAAAGATGCTTTTAATCTGCTGATGAGAAATATTTTAAAAGTTGCAGTTATGGA TAGAGTTACAGACTTTGTACTAGTCCTGGGGAAGATTCTAGTTGCTGGGTGTATAGGTGT CCTGGCCTTTCTAAATGATGGTTCTACTGAAAGACCCTATTACATGAGTCAATCTCTGCT GAAGATTTTGAAAGAGCCAAATGTGCAAACTAAGAAGCGGTAGAAGTGCAAACTCTGGTC ATCCTGCAGCGATGTTACCTTTCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGGAACCGAATCCGTATCTCCATTGCCCTGTTGAAGGAGGGGAGCAAAGCCATTGGATA TATCCCTACTACATTAATTTATCCAGTTTTAACTTTCATTTTCCTCTCAATCTGCATTTC CTATTGGGCTGTGATAGCAGTTTACTTGGCTACATCGGGGGTACCCGTATACAAAGTCAT AACCCCAAAGGGGCAGTGTATACATGAAAATAAAACCTGTGACCCACAGACTTTTAATAC AACTGAAATTGCCAAAGCTTGCCCTGGGGCCCAGTGTAACTTTGCTTTTTATGGTGGAAA GAGCCTGTACCATCAATACATCACTACCTTCCAGATATTCAATCTATTTGTCTTTCTCTG GCTTATAAACTTTGTCATTGCACTGGGTCAGTGTGCCCTTGCTGGTGCCTTTGCTTCTTA TTATTGGGCCTTGAAAAAACCTGACGACATCCCTCCATATCCACTTTTTACTGCATTTGG ACGAGCCATAAGATATCACACAGGATCCCTAGCATTTGGATCTTTAATTCTTGCAGGAAT TCAAATGTTTAGATTAATCCTAGAATACTTGGACAAACGTCTCAAAGAGGCCCAGAACAA CATTTCTAAATTCCTAAAATGCTGCCTGAGATGCTGTTTCTGGTGTTTGGAAAAAGCGGT AAAGTTTTTGAACAGAAATGCCTATATTATGATTGCGATATACGGCAAAAACTTCTGCAG GTCAGCAAAAGATGCTTTTAATCTGCTGATGAGAAATATTTTAAAAGTTGCAGTTATGGA TAGAGTTACAGACTTTGTACTAGTCCTGGGGAAGATTCTAGTTGCTGGGTGTATAGGTGT CCTGGCCTTTCTAAATGATGGTTCTACTGAAAGACCCTATTACATGAGTCAATCTCTGCT GAAGATTTTGAAAGAGCCAAATGTGCAAACTAAGAAGCGGTAGAAGTGCAAACTCTGGTC ATCCTGCAGCGATGTTACCTTTCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 227-492, gnl|bosTau2|chr3 (49167141-49166876) | |
| 227-492, gnl|canFam2|chr6 (74325180-74324940) | |
| 227-492, gnl|danRer3|chr15 (16595929-16595694) | |
| 227-492, gnl|dasNov1|scaffold_114903 (771-531) | |
| 227-492, gnl|echTel1|scaffold_286167 (9902-10142) | |
| 227-492, gnl|fr1|chrUn (196030506-196030742) | |
| 227-492, gnl|galGal2|chr8 (29910325-29910562) | |
| 227-492, gnl|hg17|chr1 (75396189-75396429) | |
| 227-492, gnl|Hg17|chr1 (75396461-75396196) | |
| 227-492, gnl|loxAfr1|scaffold_60787 (9079-8839) | |
| 227-492, gnl|mm7|chr3 (154166991-154166751) | |
| 227-492, gnl|Mm7|chr3 (154166717-154166982) | |
| 227-492, gnl|oryCun1|scaffold_215291 (113144-112903) | |
| 227-492, gnl|panTro1|chr1 (73957691-73957931) | |
| 227-492, gnl|rheMac2|chr1 (78023717-78023957) | |
| 227-492, gnl|rn3|chr8 (20444458-20444222) | |
| 227-492, gnl|tetNig1|chr1 (9774202-9773967) | |
| 227-492, gnl|xenTro1|scaffold_514 (621454-621217) | |
| 580-691, gnl|bosTau2|chr3 (49160020-49159909) | |
| 580-691, gnl|Hg17|chr1 (75393571-75393460) | |
| 580-691, gnl|Mm7|chr3 (154169750-154169861) | |
| 853-982, gnl|bosTau2|chr3 (49148152-49148023) | |
| 853-982, gnl|Hg17|chr1 (75381523-75381394) | |
| 853-982, gnl|Mm7|chr3 (154178472-154178597) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 227-492, gnl|bosTau2|chr3 (49167141-49166876) | |
| 227-492, gnl|canFam2|chr6 (74325180-74324940) | |
| 227-492, gnl|danRer3|chr15 (16595929-16595694) | |
| 227-492, gnl|dasNov1|scaffold_114903 (771-531) | |
| 227-492, gnl|echTel1|scaffold_286167 (9902-10142) | |
| 227-492, gnl|fr1|chrUn (196030506-196030742) | |
| 227-492, gnl|galGal2|chr8 (29910325-29910562) | |
| 227-492, gnl|hg17|chr1 (75396189-75396429) | |
| 227-492, gnl|Hg17|chr1 (75396461-75396196) | |
| 227-492, gnl|loxAfr1|scaffold_60787 (9079-8839) | |
| 227-492, gnl|mm7|chr3 (154166991-154166751) | |
| 227-492, gnl|Mm7|chr3 (154166717-154166982) | |
| 227-492, gnl|oryCun1|scaffold_215291 (113144-112903) | |
| 227-492, gnl|panTro1|chr1 (73957691-73957931) | |
| 227-492, gnl|rheMac2|chr1 (78023717-78023957) | |
| 227-492, gnl|rn3|chr8 (20444458-20444222) | |
| 227-492, gnl|tetNig1|chr1 (9774202-9773967) | |
| 227-492, gnl|xenTro1|scaffold_514 (621454-621217) | |
| 580-691, gnl|bosTau2|chr3 (49160020-49159909) | |
| 580-691, gnl|Hg17|chr1 (75393571-75393460) | |
| 580-691, gnl|Mm7|chr3 (154169750-154169861) | |
| 853-982, gnl|bosTau2|chr3 (49148152-49148023) | |
| 853-982, gnl|Hg17|chr1 (75381523-75381394) | |
| 853-982, gnl|Mm7|chr3 (154178472-154178597) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (0.623441) | |
| lun (0.150489) |