Non-Coding RNA Search

Ss1.1-rtes07_k8.5

Sequence:


               
               GTTTTCTTTTATACTGATAGTAACTTTAATCGTGTCACTTCAGTTATGTATTGCTATAAT
CATTAGCATTATCCTTCAGGACAGAAGGCATCTGCTCACGGTCCATGATTTAACGGTGTA
AGCCAGCTTTATGTTCAGACATTACGTTCATGACACTTTTAGCAGTGTGATACAGTGAAG
GTCCAATTGGATTAGGCTTTTGCATTGAATTCCAAAGTATTGGTAAGTCTAGCACATACC
ATGTAATCTTCCTAAACTGTTGTGGGTACATTTTTTTTAAACCTGTCTGTCTATGTATGG
CACATGCAGGTCATTTCTTGAGTAATACAGGATGACCTAAAAAATTCATAGTTAGTAAAT
CTTGAAAAATTACGGTGCTTTCAAAAGTTACTCCGATTTAAAATGAGGCTACCAATTCTG
CTTGAAAATCAGGCACGTAAGCAGTTTTACTGAGACACAGCAAAGCCCTCAGTGTGCTTG
AGTGTGATGTGTTGGAATGTGTTGCCTTTTTGGTTCATTGTTAGTCCTTTTATGTTTGCG
TGTATCTGTGTACGTCTGTGTGTTTGGTAACTATGAATTGAATAGATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTTCTTTTATACTGATAGTAACTTTAATCGTGTCACTTCAGTTATGTATTGCTATAAT
CATTAGCATTATCCTTCAGGACAGAAGGCATCTGCTCACGGTCCATGATTTAACGGTGTA
AGCCAGCTTTATGTTCAGACATTACGTTCATGACACTTTTAGCAGTGTGATACAGTGAAG
GTCCAATTGGATTAGGCTTTTGCATTGAATTCCAAAGTATTGGTAAGTCTAGCACATACC
ATGTAATCTTCCTAAACTGTTGTGGGTACATTTTTTTTAAACCTGTCTGTCTATGTATGG
CACATGCAGGTCATTTCTTGAGTAATACAGGATGACCTAAAAAATTCATAGTTAGTAAAT
CTTGAAAAATTACGGTGCTTTCAAAAGTTACTCCGATTTAAAATGAGGCTACCAATTCTG
CTTGAAAATCAGGCACGTAAGCAGTTTTACTGAGACACAGCAAAGCCCTCAGTGTGCTTG
AGTGTGATGTGTTGGAATGTGTTGCCTTTTTGGTTCATTGTTAGTCCTTTTATGTTTGCG
TGTATCTGTGTACGTCTGTGTGTTTGGTAACTATGAATTGAATAGATG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               23-588, gnl|bosTau2|chr24 (31128561-31127976)
               

               
               23-588, gnl|Hg17|chr18 (12776437-12775865)
               

               
               23-588, gnl|Mm7|chr18 (68058736-68058191)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               23-588, gnl|bosTau2|chr24 (31128561-31127976)
               

               
               23-588, gnl|Hg17|chr18 (12776437-12775865)
               

               
               23-588, gnl|Mm7|chr18 (68058736-68058191)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tes (0.207814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	23-588, gnl\|bosTau2\|chr24 (31128561-31127976)
	23-588, gnl\|Hg17\|chr18 (12776437-12775865)
	23-588, gnl\|Mm7\|chr18 (68058736-68058191)