Ss1.1-rtes08_h5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAGGCTGCGTTGCGGTGGCCCTGTCCGCGCCGTGCAACACTGTACTGCAAGTCAGTCAAT ACGATAATTTGTCACTTCAACTCAAATGGAAAAGTATGAAAAACTGGCTAAGATTGGAGA AGGGTCTTATGGGGTTGTATTCAAATGCAGAAACAAAACCTCCGGACAAGTGGTAGCTAT TAAAAAATTTGTGGAATCCGAAGATGACCCTGTAGTTAGGAAAATAGCTCTCAGAGAAAT ACGCATGTTGAAGCAATTAAAACACCCAAATCTTGTGAACCTCATTGAGGTGTTCAGAAG AAAAAGGAAAATGCATTTAGTTTTCGAATATTGTGATCATACACTTTTAAATGAGCTGGA AAGAAACCCAAATGGAGTTGCTGATGGAGTGATTAAAAGTGTGTTATGGCAAACACTTCA AGCTCTTAATTTCTGTCATAAGCATAATTGTATTCACAGAGATGTAAAACCAGAAAATAT TCTAATAACCAGGCAAGGAATAATCAAGATCTGTGACTTTGGGTTTGCACGAATTCTGAT TCCAGGAGATGCCTACACTGACTATGTCGCTACAAGATGGTACCGAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAGGCTGCGTTGCGGTGGCCCTGTCCGCGCCGTGCAACACTGTACTGCAAGTCAGTCAAT ACGATAATTTGTCACTTCAACTCAAATGGAAAAGTATGAAAAACTGGCTAAGATTGGAGA AGGGTCTTATGGGGTTGTATTCAAATGCAGAAACAAAACCTCCGGACAAGTGGTAGCTAT TAAAAAATTTGTGGAATCCGAAGATGACCCTGTAGTTAGGAAAATAGCTCTCAGAGAAAT ACGCATGTTGAAGCAATTAAAACACCCAAATCTTGTGAACCTCATTGAGGTGTTCAGAAG AAAAAGGAAAATGCATTTAGTTTTCGAATATTGTGATCATACACTTTTAAATGAGCTGGA AAGAAACCCAAATGGAGTTGCTGATGGAGTGATTAAAAGTGTGTTATGGCAAACACTTCA AGCTCTTAATTTCTGTCATAAGCATAATTGTATTCACAGAGATGTAAAACCAGAAAATAT TCTAATAACCAGGCAAGGAATAATCAAGATCTGTGACTTTGGGTTTGCACGAATTCTGAT TCCAGGAGATGCCTACACTGACTATGTCGCTACAAGATGGTACCGAGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 86-253, gnl|bosTau2|chr10 (28788629-28788462) | |
| 86-253, gnl|canFam2|chr8 (29834074-29834267) | |
| 86-253, gnl|danRer3|chr13 (39392924-39393133) | |
| 86-253, gnl|dasNov1|scaffold_3225 (52244-52445) | |
| 86-253, gnl|echTel1|scaffold_278949 (15535-15708) | |
| 86-253, gnl|fr1|chrUn (2741433-2741225) | |
| 86-253, gnl|galGal2|chr5 (54480280-54480449) | |
| 86-253, gnl|hg17|chr14 (49932150-49932372) | |
| 86-253, gnl|Hg17|chr14 (49932336-49932169) | |
| 86-253, gnl|loxAfr1|scaffold_25062 (7204-7005) | |
| 86-253, gnl|mm7|chr12 (67730970-67731171) | |
| 86-253, gnl|Mm7|chr12 (67731146-67730979) | |
| 86-253, gnl|monDom2|scaffold_23 (42557588-42557790) | |
| 86-253, gnl|oryCun1|scaffold_189105 (59821-60015) | |
| 86-253, gnl|panTro1|chr15 (49345972-49346195) | |
| 86-253, gnl|rheMac2|chr7 (113457541-113457762) | |
| 86-253, gnl|rn3|chr6 (91872992-91873190) | |
| 86-253, gnl|tetNig1|chr10 (11303571-11303401) | |
| 86-253, gnl|xenTro1|scaffold_1266 (151164-150991) | |
| 452-588, gnl|bosTau2|chr7 (31324482-31324621) | |
| 452-588, gnl|Hg17|chr5 (133714014-133713875) | |
| 452-588, gnl|Mm7|chr11 (51975037-51975176) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 86-253, gnl|bosTau2|chr10 (28788629-28788462) | |
| 86-253, gnl|canFam2|chr8 (29834074-29834267) | |
| 86-253, gnl|danRer3|chr13 (39392924-39393133) | |
| 86-253, gnl|dasNov1|scaffold_3225 (52244-52445) | |
| 86-253, gnl|echTel1|scaffold_278949 (15535-15708) | |
| 86-253, gnl|fr1|chrUn (2741433-2741225) | |
| 86-253, gnl|galGal2|chr5 (54480280-54480449) | |
| 86-253, gnl|hg17|chr14 (49932150-49932372) | |
| 86-253, gnl|Hg17|chr14 (49932336-49932169) | |
| 86-253, gnl|loxAfr1|scaffold_25062 (7204-7005) | |
| 86-253, gnl|mm7|chr12 (67730970-67731171) | |
| 86-253, gnl|Mm7|chr12 (67731146-67730979) | |
| 86-253, gnl|monDom2|scaffold_23 (42557588-42557790) | |
| 86-253, gnl|oryCun1|scaffold_189105 (59821-60015) | |
| 86-253, gnl|panTro1|chr15 (49345972-49346195) | |
| 86-253, gnl|rheMac2|chr7 (113457541-113457762) | |
| 86-253, gnl|rn3|chr6 (91872992-91873190) | |
| 86-253, gnl|tetNig1|chr10 (11303571-11303401) | |
| 86-253, gnl|xenTro1|scaffold_1266 (151164-150991) | |
| 452-588, gnl|bosTau2|chr7 (31324482-31324621) | |
| 452-588, gnl|Hg17|chr5 (133714014-133713875) | |
| 452-588, gnl|Mm7|chr11 (51975037-51975176) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (0.207814) | |
| cut (0.169924) |