Non-Coding RNA Search

Ss1.1-rtes08_i19.5

Sequence:


               
               GTTAATTTTTTCAGACGAAGTGAAGCTTTCTGGCGAGGTGCCCCTGTGGAGGCCTTGGGG
TAGACAACTGCAGAATACTGATGAGTCTTCCAGGTTTGGACATAGGACTCAGACTGAGCC
CTACAGTATAGCCCCTGTCCACTAGCAGGGATCCTCAGCCAAGCCATGGAAGGTTGTAGG
TCTGGCCCAGCTGGGCGACTGTCTCCTTGGAGAACTGGGGGTGGGGAAAGGGCATGGTAG
AAAGCTGGGCCTTTGGCTTTGACTGGCTGCCCTGTGTTTTAATCTAGTATCAGGAGATAC
TAAAAGTAACTTTTCGTACCCACACTTTCTTTTTCCTTACCTTCTGCCTCTACTTTCTAC
AGTGGGGCCTTGAGGATCTTGAAAACCCAGTGCATGGAATCTGATAGATGTGAAGGAAGG
CTGCCCTAAGTATACACCGGGAGTATACACGAAGTATACACTGTTTCATTCCTGGCAATA
TATTTTTCTCTTTTACTGCCATTCCCATTAATGCCATCTATGACTAAAGCCACACATTTT
CCTAAGGGAAGACAAGTCATCCACCACGAAAGATGACAAAACTCTACCCAGTTTGCACAG
TTAATTGATGTGAATCATTAGTGAATGACTCTGGCTTCAGTTAATAAAGTTTAAATAATG
TGTTTTTAAATGCTAGCCGTAACTTCGTTCAAACTCAACCCACTTCTAGAAGCCTTTATT
ATAGAATCGAAGAGAATTTTTCCCTTGATTGGTTGTGAAAGAAATACAGGCATACCTCGT
TTTATTCCATGCACTTCATTCTATTGTGCTTTGGAGATAGTTTTTTACAATTGAAGGTTT
GTGGCAGCCCTCGAGCAAGTCTATCAGCACCATTTTTCCAATAGCATTTGCTCACCTCAT
GTCTCCCTGTCACAGTTTGCCAATTCCTGCAATATTTCAAACTTTTTAATTATTCTTATA
TTGATCTGTGACTGATGATCTGTGATGTTACTGTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTAATTTTTTCAGACGAAGTGAAGCTTTCTGGCGAGGTGCCCCTGTGGAGGCCTTGGGG
TAGACAACTGCAGAATACTGATGAGTCTTCCAGGTTTGGACATAGGACTCAGACTGAGCC
CTACAGTATAGCCCCTGTCCACTAGCAGGGATCCTCAGCCAAGCCATGGAAGGTTGTAGG
TCTGGCCCAGCTGGGCGACTGTCTCCTTGGAGAACTGGGGGTGGGGAAAGGGCATGGTAG
AAAGCTGGGCCTTTGGCTTTGACTGGCTGCCCTGTGTTTTAATCTAGTATCAGGAGATAC
TAAAAGTAACTTTTCGTACCCACACTTTCTTTTTCCTTACCTTCTGCCTCTACTTTCTAC
AGTGGGGCCTTGAGGATCTTGAAAACCCAGTGCATGGAATCTGATAGATGTGAAGGAAGG
CTGCCCTAAGTATACACCGGGAGTATACACGAAGTATACACTGTTTCATTCCTGGCAATA
TATTTTTCTCTTTTACTGCCATTCCCATTAATGCCATCTATGACTAAAGCCACACATTTT
CCTAAGGGAAGACAAGTCATCCACCACGAAAGATGACAAAACTCTACCCAGTTTGCACAG
TTAATTGATGTGAATCATTAGTGAATGACTCTGGCTTCAGTTAATAAAGTTTAAATAATG
TGTTTTTAAATGCTAGCCGTAACTTCGTTCAAACTCAACCCACTTCTAGAAGCCTTTATT
ATAGAATCGAAGAGAATTTTTCCCTTGATTGGTTGTGAAAGAAATACAGGCATACCTCGT
TTTATTCCATGCACTTCATTCTATTGTGCTTTGGAGATAGTTTTTTACAATTGAAGGTTT
GTGGCAGCCCTCGAGCAAGTCTATCAGCACCATTTTTCCAATAGCATTTGCTCACCTCAT
GTCTCCCTGTCACAGTTTGCCAATTCCTGCAATATTTCAAACTTTTTAATTATTCTTATA
TTGATCTGTGACTGATGATCTGTGATGTTACTGTTG

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               476-992, gnl|bosTau2|chr20 (21501456-21500930)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               476-992, gnl|bosTau2|chr20 (21501456-21500930)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               tes (0.207814)
               

               
               kid (0.129735)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)
               

               
               kid (0.129735)