Ss1.1-rtes11_n16.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAATAAGATGCTTCGATTACAGCAAGAAGGTACTGAGAATGAACGTATTGAAGAACTTCA GGAGCAGCTAGAAAGTCTGAAGGACAAGATGAATGAACTGGAAACCGAAAGTTGGAAGCT CATATGGAAAAACTAACAGAGGTCCAGGAAGAATTACAGAAGAAACAGGAGCTCATTGAA GACCTCCAGCCAGATGTAAACCAGAATGTGCAAAAGATCAGTGAACTTGAAGCTGCTCTT CAGAAGAAAGATGAAGATATGAAAGCAATGGAGGAAAGATACAAAATGTACTTAGAGAAG GCAAGAAATGTAATAAAAACATTAGATCCCAAATTAAATCCAGCATCAGCTGAAATAATG CTACTTAGAAAGCAGTTGGCAGAGAAAGAGAGAAGAATCGAGATTCTAGAGAGTGAATGT AAAGTAGCAAAATTCCGTGATTATGAAGAAAAACTCATTGTTTCTGCCTGGTATAATAAG AGTCTAGCATTCCAGAAGCTGGGGATGGAATCTAGACTTGTGAGCGGCAGTGGTACTTGC AGAGACACAGGCGCCTGTGCCCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAATAAGATGCTTCGATTACAGCAAGAAGGTACTGAGAATGAACGTATTGAAGAACTTCA GGAGCAGCTAGAAAGTCTGAAGGACAAGATGAATGAACTGGAAACCGAAAGTTGGAAGCT CATATGGAAAAACTAACAGAGGTCCAGGAAGAATTACAGAAGAAACAGGAGCTCATTGAA GACCTCCAGCCAGATGTAAACCAGAATGTGCAAAAGATCAGTGAACTTGAAGCTGCTCTT CAGAAGAAAGATGAAGATATGAAAGCAATGGAGGAAAGATACAAAATGTACTTAGAGAAG GCAAGAAATGTAATAAAAACATTAGATCCCAAATTAAATCCAGCATCAGCTGAAATAATG CTACTTAGAAAGCAGTTGGCAGAGAAAGAGAGAAGAATCGAGATTCTAGAGAGTGAATGT AAAGTAGCAAAATTCCGTGATTATGAAGAAAAACTCATTGTTTCTGCCTGGTATAATAAG AGTCTAGCATTCCAGAAGCTGGGGATGGAATCTAGACTTGTGAGCGGCAGTGGTACTTGC AGAGACACAGGCGCCTGTGCCCCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 1-108, gnl|bosTau2|chr3 (57521396-57521289) | |
| 1-108, gnl|canFam2|chr5 (53013762-53013598) | |
| 1-108, gnl|danRer3|chrNA (157450517-157450670) | |
| 1-108, gnl|dasNov1|scaffold_66325 (5471-5618) | |
| 1-108, gnl|echTel1|scaffold_315018 (48062-47898) | |
| 1-108, gnl|fr1|chrUn (71452126-71451959) | |
| 1-108, gnl|galGal2|chr8 (26900176-26900321) | |
| 1-108, gnl|hg17|chr1 (60037860-60038024) | |
| 1-108, gnl|Hg17|chr1 (60037908-60038015) | |
| 1-108, gnl|loxAfr1|scaffold_34 (119159-119323) | |
| 1-108, gnl|mm7|chr4 (95405773-95405948) | |
| 1-108, gnl|Mm7|chr4 (95405832-95405939) | |
| 1-108, gnl|monDom2|scaffold_40 (15495094-15494930) | |
| 1-108, gnl|oryCun1|scaffold_179094 (94300-94136) | |
| 1-108, gnl|panTro1|chr1 (58372233-58372397) | |
| 1-108, gnl|rheMac2|chr1 (62693118-62693282) | |
| 1-108, gnl|rn3|chr5 (116391295-116391459) | |
| 1-108, gnl|tetNig1|chr1_random (2987255-2987401) | |
| 1-108, gnl|xenTro1|scaffold_1 (3505387-3505227) | |
| 208-311, gnl|bosTau2|chr3 (57515748-57515645) | |
| 208-311, gnl|canFam2|chr5 (53008757-53008620) | |
| 208-311, gnl|danRer3|chrNA (157453147-157453302) | |
| 208-311, gnl|dasNov1|scaffold_138430 (605-746) | |
| 208-311, gnl|echTel1|scaffold_190017 (15592-15463) | |
| 208-311, gnl|fr1|chrUn (71451379-71451277) | |
| 208-311, gnl|galGal2|chr8 (26902576-26902710) | |
| 208-311, gnl|hg17|chr1 (60043530-60043673) | |
| 208-311, gnl|Hg17|chr1 (60043564-60043667) | |
| 208-311, gnl|loxAfr1|scaffold_56867 (27218-27086) | |
| 208-311, gnl|mm7|chr4 (95410171-95410303) | |
| 208-311, gnl|Mm7|chr4 (95410194-95410297) | |
| 208-311, gnl|monDom2|scaffold_40 (15489685-15489554) | |
| 208-311, gnl|oryCun1|scaffold_200958 (124695-124559) | |
| 208-311, gnl|panTro1|chr1 (58377989-58378132) | |
| 208-311, gnl|rheMac2|chr1 (62698772-62698915) | |
| 208-311, gnl|rn3|chr5 (116395730-116395862) | |
| 208-311, gnl|tetNig1|chr1_random (2988009-2988133) | |
| 208-311, gnl|xenTro1|scaffold_1 (3502416-3502240) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-108, gnl|bosTau2|chr3 (57521396-57521289) | |
| 1-108, gnl|canFam2|chr5 (53013762-53013598) | |
| 1-108, gnl|danRer3|chrNA (157450517-157450670) | |
| 1-108, gnl|dasNov1|scaffold_66325 (5471-5618) | |
| 1-108, gnl|echTel1|scaffold_315018 (48062-47898) | |
| 1-108, gnl|fr1|chrUn (71452126-71451959) | |
| 1-108, gnl|galGal2|chr8 (26900176-26900321) | |
| 1-108, gnl|hg17|chr1 (60037860-60038024) | |
| 1-108, gnl|Hg17|chr1 (60037908-60038015) | |
| 1-108, gnl|loxAfr1|scaffold_34 (119159-119323) | |
| 1-108, gnl|mm7|chr4 (95405773-95405948) | |
| 1-108, gnl|Mm7|chr4 (95405832-95405939) | |
| 1-108, gnl|monDom2|scaffold_40 (15495094-15494930) | |
| 1-108, gnl|oryCun1|scaffold_179094 (94300-94136) | |
| 1-108, gnl|panTro1|chr1 (58372233-58372397) | |
| 1-108, gnl|rheMac2|chr1 (62693118-62693282) | |
| 1-108, gnl|rn3|chr5 (116391295-116391459) | |
| 1-108, gnl|tetNig1|chr1_random (2987255-2987401) | |
| 1-108, gnl|xenTro1|scaffold_1 (3505387-3505227) | |
| 208-311, gnl|bosTau2|chr3 (57515748-57515645) | |
| 208-311, gnl|canFam2|chr5 (53008757-53008620) | |
| 208-311, gnl|danRer3|chrNA (157453147-157453302) | |
| 208-311, gnl|dasNov1|scaffold_138430 (605-746) | |
| 208-311, gnl|echTel1|scaffold_190017 (15592-15463) | |
| 208-311, gnl|fr1|chrUn (71451379-71451277) | |
| 208-311, gnl|galGal2|chr8 (26902576-26902710) | |
| 208-311, gnl|hg17|chr1 (60043530-60043673) | |
| 208-311, gnl|Hg17|chr1 (60043564-60043667) | |
| 208-311, gnl|loxAfr1|scaffold_56867 (27218-27086) | |
| 208-311, gnl|mm7|chr4 (95410171-95410303) | |
| 208-311, gnl|Mm7|chr4 (95410194-95410297) | |
| 208-311, gnl|monDom2|scaffold_40 (15489685-15489554) | |
| 208-311, gnl|oryCun1|scaffold_200958 (124695-124559) | |
| 208-311, gnl|panTro1|chr1 (58377989-58378132) | |
| 208-311, gnl|rheMac2|chr1 (62698772-62698915) | |
| 208-311, gnl|rn3|chr5 (116395730-116395862) | |
| 208-311, gnl|tetNig1|chr1_random (2988009-2988133) | |
| 208-311, gnl|xenTro1|scaffold_1 (3502416-3502240) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| cte (0.58548) | |
| tes (0.415628) | |
| lin (0.145603) | |
| tra (0.123092) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cte (0.58548) | |
| tes (0.415628) | |
| lin (0.145603) | |
| tra (0.123092) |