Non-Coding RNA Search

Ss1.1-rtes11_p7.5

Sequence:


               
               GTAAGATATTTAATATATAAATAAAACCTTCCTTACTAAAACGAATAATAAAGTGAGAGA
ATCTATCCTCCCACATTAGTATATTTTTATAAACTTTATAATCCTAGTCAGAGCCACTGA
AGCTATCAATTCCCACTTCACTCTTGCTTCACTGAGCCTCTCATTCCTACTCATTGCTTG
AGGTGTTTGACGCATTAGGCTTCTTTCTCCCACTACTTGGCTTAAGGCTCAGATTCTTCC
TCTTCCTCTTCCTCTTCCTCTTCCTCCTCCTCCTCCTCTTCCTCCTCTGCTTCCTCTTCT
GGGGCAGCCTCTTCTGGGGCAGCCTCTGGTGCAGCAGCCCCTGCTGCGGCAGCCTCTGCA
GGCGCCTTTTCTGCTGCCTCTCTACAAATGGTGGTGACGCAAAAAATTATGATTATTACT
ATTATGATAAAAAGTATAATAAGCAGTATCATCATCCAGTCTAAGAAGGCTTCTTGATGT
CTGGAATCACTGCTAGTGTTTTGACCATCACCTTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTAAGATATTTAATATATAAATAAAACCTTCCTTACTAAAACGAATAATAAAGTGAGAGA
ATCTATCCTCCCACATTAGTATATTTTTATAAACTTTATAATCCTAGTCAGAGCCACTGA
AGCTATCAATTCCCACTTCACTCTTGCTTCACTGAGCCTCTCATTCCTACTCATTGCTTG
AGGTGTTTGACGCATTAGGCTTCTTTCTCCCACTACTTGGCTTAAGGCTCAGATTCTTCC
TCTTCCTCTTCCTCTTCCTCTTCCTCCTCCTCCTCCTCTTCCTCCTCTGCTTCCTCTTCT
GGGGCAGCCTCTTCTGGGGCAGCCTCTGGTGCAGCAGCCCCTGCTGCGGCAGCCTCTGCA
GGCGCCTTTTCTGCTGCCTCTCTACAAATGGTGGTGACGCAAAAAATTATGATTATTACT
ATTATGATAAAAAGTATAATAAGCAGTATCATCATCCAGTCTAAGAAGGCTTCTTGATGT
CTGGAATCACTGCTAGTGTTTTGACCATCACCTTGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-466, gnl|bosTau2|chr17 (36779685-36779224)
               

               
               1-466, gnl|Hg17|chr12 (110802434-110801980)
               

               
               1-466, gnl|Mm7|chr5 (120734385-120734861)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-466, gnl|bosTau2|chr17 (36779685-36779224)
               

               
               1-466, gnl|Hg17|chr12 (110802434-110801980)
               

               
               1-466, gnl|Mm7|chr5 (120734385-120734861)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cte (0.58548)
               

               
               tes (0.415628)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.58548)
               

               
               tes (0.415628)

	1-466, gnl\|bosTau2\|chr17 (36779685-36779224)
	1-466, gnl\|Hg17\|chr12 (110802434-110801980)
	1-466, gnl\|Mm7\|chr5 (120734385-120734861)