Non-Coding RNA Search

Ss1.1-rtes13_c4.5

Sequence:


               
               AATTTCCAAAATGGAGCTATCTCTATTTTCAAACCAGAGAACATGAGGCATACATTTTTC
AGTGATTGTTATAAAATCAGTCAATTCTTAGACAAGAGAAATGCATCTGTACTGAACAGA
GTGCTGCTGTACTCAGTTTTGTGGTCATCTGAACCAATGATCTTCAGATCTGAAAAGCTT
ATGATGTGCTCAAGTTTTTTCTCATAAAAAGCCATCCTTTTCATTTCCTTCCTATGTGAC
CATGAGTCTAAAACAATTAAAGTGACCATTTTATTTTAGTGGTATTAATATAATCCCTTT
ATGAACTTTCCCCCAAATCTTCTCGTAAGTGCTTATGAATTTCTTTTATTTATTGTGATA
CTTCTAAAATATAAATTCTTTCCAGTTTGGAAATAGTTTAAGTTTTTTAAAATGTTGGCC
CTTTTTGCAGAAGTACCGAAAAGCCATGCCTGTATTCAGTTCAACTGGATATGGAATATT
ATTATGTGATTTAAATTTATATGAAAAGTATTCACACAGTGCATTTGTCAGTTTTTAAAG
ATTTTTGCTTCTTCAGTTATCTTAAAATGTTGACATTTTAAAAATTATTGCTGTTTTTTA
ATGCCAACTTAATTAGACTATAGATTTCTTATAGATCAGTAAACACTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATTTCCAAAATGGAGCTATCTCTATTTTCAAACCAGAGAACATGAGGCATACATTTTTC
AGTGATTGTTATAAAATCAGTCAATTCTTAGACAAGAGAAATGCATCTGTACTGAACAGA
GTGCTGCTGTACTCAGTTTTGTGGTCATCTGAACCAATGATCTTCAGATCTGAAAAGCTT
ATGATGTGCTCAAGTTTTTTCTCATAAAAAGCCATCCTTTTCATTTCCTTCCTATGTGAC
CATGAGTCTAAAACAATTAAAGTGACCATTTTATTTTAGTGGTATTAATATAATCCCTTT
ATGAACTTTCCCCCAAATCTTCTCGTAAGTGCTTATGAATTTCTTTTATTTATTGTGATA
CTTCTAAAATATAAATTCTTTCCAGTTTGGAAATAGTTTAAGTTTTTTAAAATGTTGGCC
CTTTTTGCAGAAGTACCGAAAAGCCATGCCTGTATTCAGTTCAACTGGATATGGAATATT
ATTATGTGATTTAAATTTATATGAAAAGTATTCACACAGTGCATTTGTCAGTTTTTAAAG
ATTTTTGCTTCTTCAGTTATCTTAAAATGTTGACATTTTAAAAATTATTGCTGTTTTTTA
ATGCCAACTTAATTAGACTATAGATTTCTTATAGATCAGTAAACACTC

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               46-648, gnl|bosTau2|chr5 (40842882-40843460)
               

               
               46-648, gnl|Hg17|chr12 (105888922-105888317)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               46-648, gnl|bosTau2|chr5 (40842882-40843460)
               

               
               46-648, gnl|Hg17|chr12 (105888922-105888317)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               tes (0.207814)
               

               
               isp (0.150376)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)
               

               
               isp (0.150376)

	46-648, gnl\|bosTau2\|chr5 (40842882-40843460)
	46-648, gnl\|Hg17\|chr12 (105888922-105888317)