Ss1.1-rtes14_f23.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATCTCTGAAAACCAAAATGTCTGAACTTCGCCTCTACTGTGACCTCCTAATGAAGCAAGT TCATACGATCCAAGAATTTGTTCACCATGATGAGAATCATTCATCTCCAAGCATAGAGAA CATGAATGAAGCCTCTTCTCTACTTAGTGCCACATGTAATACCTTCATCACAACACTTGA GGAATGTGTGAAGATAGCGAATGCCAAGTTTAAACCTGAGATGTTTCAGCTGTCCCATCC GGATCCCTTAGTTTCTCCTGTGTCACCTTCTCCTGTTCAAATGATGAAGCGTTCTGTCAG CCATCCTGGTTCTTGCAGTTCAGAGAGGAGTAGCCACTCTATAAAAGAACCAGTGTCTAC ACTCCACCGATTCTCCCAGCGACGCCGAAGAACCTACTCAGATACAGACTCCTGCAATGA TGTTCCTCTTGAAGACCCAGATAGACCTGTTCACTGTTCAAGAAATACACTTAATGGAGA TTTGGCATCAGCAACCATTCCTGAAGAAAGCAGACTTATGGCCAAAAAAAAATCTGAATC GGAAGATCCTCTTCCATCCTTCTCTCCCTGAGGAAATGGAAGTGTCCAACTTCCTCTAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATCTCTGAAAACCAAAATGTCTGAACTTCGCCTCTACTGTGACCTCCTAATGAAGCAAGT TCATACGATCCAAGAATTTGTTCACCATGATGAGAATCATTCATCTCCAAGCATAGAGAA CATGAATGAAGCCTCTTCTCTACTTAGTGCCACATGTAATACCTTCATCACAACACTTGA GGAATGTGTGAAGATAGCGAATGCCAAGTTTAAACCTGAGATGTTTCAGCTGTCCCATCC GGATCCCTTAGTTTCTCCTGTGTCACCTTCTCCTGTTCAAATGATGAAGCGTTCTGTCAG CCATCCTGGTTCTTGCAGTTCAGAGAGGAGTAGCCACTCTATAAAAGAACCAGTGTCTAC ACTCCACCGATTCTCCCAGCGACGCCGAAGAACCTACTCAGATACAGACTCCTGCAATGA TGTTCCTCTTGAAGACCCAGATAGACCTGTTCACTGTTCAAGAAATACACTTAATGGAGA TTTGGCATCAGCAACCATTCCTGAAGAAAGCAGACTTATGGCCAAAAAAAAATCTGAATC GGAAGATCCTCTTCCATCCTTCTCTCCCTGAGGAAATGGAAGTGTCCAACTTCCTCTAAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 117-296, gnl|bosTau2|chr2 (7940627-7940448) | |
| 117-296, gnl|Hg17|chr2 (179185728-179185907) | |
| 117-296, gnl|Mm7|chr2 (76530996-76531180) | |
| 444-600, gnl|bosTau2|chr2 (7929774-7929618) | |
| 444-600, gnl|canFam2|chr36 (25155953-25156246) | |
| 444-600, gnl|canFam2|chr36 (25156169-25155974) | |
| 444-600, gnl|dasNov1|scaffold_6770 (27427-27145) | |
| 444-600, gnl|dasNov1|scaffold_6770 (27227-27426) | |
| 444-600, gnl|echTel1|scaffold_317123 (392600-392298) | |
| 444-600, gnl|echTel1|scaffold_317123 (392383-392579) | |
| 444-600, gnl|galGal2|chr7 (16189159-16188878) | |
| 444-600, gnl|galGal2|chr7 (16188940-16189138) | |
| 444-600, gnl|hg17|chr19 (46719175-46719371) | |
| 444-600, gnl|hg17|chr2 (179193975-179194268) | |
| 444-600, gnl|Hg17|chr2 (179193994-179194150) | |
| 444-600, gnl|loxAfr1|scaffold_7218 (6962-7236) | |
| 444-600, gnl|loxAfr1|scaffold_92577 (78-272) | |
| 444-600, gnl|mm7|chr2 (76539079-76539442) | |
| 444-600, gnl|mm7|chr2 (76539374-76539102) | |
| 444-600, gnl|Mm7|chr2 (76539100-76539334) | |
| 444-600, gnl|monDom2|scaffold_2 (79353653-79353957) | |
| 444-600, gnl|monDom2|scaffold_2 (79353870-79353674) | |
| 444-600, gnl|oryCun1|scaffold_192842 (40306-40049) | |
| 444-600, gnl|oryCun1|scaffold_192842 (40117-40306) | |
| 444-600, gnl|panTro1|chr13 (68980372-68980665) | |
| 444-600, gnl|panTro1|chr13 (68980589-68980393) | |
| 444-600, gnl|rheMac2|chr12 (42155235-42155524) | |
| 444-600, gnl|rheMac2|chr12 (42155452-42155256) | |
| 444-600, gnl|rn3|chr3 (59292348-59292627) | |
| 444-600, gnl|rn3|chr3 (59292562-59292371) | |
| 444-600, gnl|xenTro1|scaffold_546 (294829-295110) | |
| 444-600, gnl|xenTro1|scaffold_546 (295043-294841) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 117-296, gnl|bosTau2|chr2 (7940627-7940448) | |
| 117-296, gnl|Hg17|chr2 (179185728-179185907) | |
| 117-296, gnl|Mm7|chr2 (76530996-76531180) | |
| 444-600, gnl|bosTau2|chr2 (7929774-7929618) | |
| 444-600, gnl|canFam2|chr36 (25155953-25156246) | |
| 444-600, gnl|canFam2|chr36 (25156169-25155974) | |
| 444-600, gnl|dasNov1|scaffold_6770 (27427-27145) | |
| 444-600, gnl|dasNov1|scaffold_6770 (27227-27426) | |
| 444-600, gnl|echTel1|scaffold_317123 (392600-392298) | |
| 444-600, gnl|echTel1|scaffold_317123 (392383-392579) | |
| 444-600, gnl|galGal2|chr7 (16189159-16188878) | |
| 444-600, gnl|galGal2|chr7 (16188940-16189138) | |
| 444-600, gnl|hg17|chr19 (46719175-46719371) | |
| 444-600, gnl|hg17|chr2 (179193975-179194268) | |
| 444-600, gnl|Hg17|chr2 (179193994-179194150) | |
| 444-600, gnl|loxAfr1|scaffold_7218 (6962-7236) | |
| 444-600, gnl|loxAfr1|scaffold_92577 (78-272) | |
| 444-600, gnl|mm7|chr2 (76539079-76539442) | |
| 444-600, gnl|mm7|chr2 (76539374-76539102) | |
| 444-600, gnl|Mm7|chr2 (76539100-76539334) | |
| 444-600, gnl|monDom2|scaffold_2 (79353653-79353957) | |
| 444-600, gnl|monDom2|scaffold_2 (79353870-79353674) | |
| 444-600, gnl|oryCun1|scaffold_192842 (40306-40049) | |
| 444-600, gnl|oryCun1|scaffold_192842 (40117-40306) | |
| 444-600, gnl|panTro1|chr13 (68980372-68980665) | |
| 444-600, gnl|panTro1|chr13 (68980589-68980393) | |
| 444-600, gnl|rheMac2|chr12 (42155235-42155524) | |
| 444-600, gnl|rheMac2|chr12 (42155452-42155256) | |
| 444-600, gnl|rn3|chr3 (59292348-59292627) | |
| 444-600, gnl|rn3|chr3 (59292562-59292371) | |
| 444-600, gnl|xenTro1|scaffold_546 (294829-295110) | |
| 444-600, gnl|xenTro1|scaffold_546 (295043-294841) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (0.415628) |