Non-Coding RNA Search

Ss1.1-rtes14_h23.5

Sequence:


               
               TCCATGGTCTTTTTTGCATACTTTATAGTCACTCGACAGGATTATACTTACTCAGCTGTT
AAGAGCCGGCAGTTTCTTCACTTCTTCCACAAGAGATCAAAGCAGCAGCATTTTGACGTG
GCACAGTACAACAAGCTCAAAGAAGATCTTGCTAAGGCTACCGAAGCCCTGAGACGTGTG
CGCCACTCTCTCTACCTGCAGATGCCGGTGGAGGAACTCGATGAAAAGAAGTAATCTTAC
ATTTTTAAATGTCAGTGAATTTTTCCATTATGTGTTCATTTTGCAACTTAGCAACTGGAA
CTTTTTTAGTCCCGTAGTATATTTAATTTGACTGTTTCAATCTCTTTTGTTAATAAAAAA
AAATGCTTACAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCATGGTCTTTTTTGCATACTTTATAGTCACTCGACAGGATTATACTTACTCAGCTGTT
AAGAGCCGGCAGTTTCTTCACTTCTTCCACAAGAGATCAAAGCAGCAGCATTTTGACGTG
GCACAGTACAACAAGCTCAAAGAAGATCTTGCTAAGGCTACCGAAGCCCTGAGACGTGTG
CGCCACTCTCTCTACCTGCAGATGCCGGTGGAGGAACTCGATGAAAAGAAGTAATCTTAC
ATTTTTAAATGTCAGTGAATTTTTCCATTATGTGTTCATTTTGCAACTTAGCAACTGGAA
CTTTTTTAGTCCCGTAGTATATTTAATTTGACTGTTTCAATCTCTTTTGTTAATAAAAAA
AAATGCTTACAAAAAAAAAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61815143|ref|XP_580892.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61815143|ref|XP_580892.1|

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               4-377, gnl|bosTau2|chr19 (53524093-53524437)
               

               
               4-377, gnl|Hg17|chr4 (110963371-110966471)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-377, gnl|bosTau2|chr19 (53524093-53524437)
               

               
               4-377, gnl|Hg17|chr4 (110963371-110966471)

Expressed library(ies): 8 entry(ies)

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Expressed library(ies): 8 entry(ies)

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               csk (0.422238)
               

               
               sto (0.359648)
               

               
               fbs (0.350693)
               

               
               tes (0.207814)
               

               
               ski (0.146735)
               

               
               lnt (0.142308)
               

               
               kid (0.129735)
               

               
               jej (0.0989218)

Expressed library(ies): 8 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               csk (0.422238)
               

               
               sto (0.359648)
               

               
               fbs (0.350693)
               

               
               tes (0.207814)
               

               
               ski (0.146735)
               

               
               lnt (0.142308)
               

               
               kid (0.129735)
               

               
               jej (0.0989218)

	4-377, gnl\|bosTau2\|chr19 (53524093-53524437)
	4-377, gnl\|Hg17\|chr4 (110963371-110966471)

	csk (0.422238)
	sto (0.359648)
	fbs (0.350693)
	tes (0.207814)
	ski (0.146735)
	lnt (0.142308)
	kid (0.129735)
	jej (0.0989218)