Non-Coding RNA Search

Ss1.1-rtes14_n15.5

Sequence:


               
               TTTTTCAAGTCTTCCAGGTATTTGTTAGTTTAGATACTATGTAACTTTTTCAGGGAATAG
TTTAAGCTTTATTCATTCATGCAATACTAAAGAGAAATAAGAATACTGCAATTTTGTGCT
GGCTTTGAACAATTATGAACACTAATGAAGGACACATGAATCCTGAAGGAAGATTTTTAA
AAAAATGTTTCGTTTCTTCTTACAAATGGAGATTTTTTTGTACCAGCTTTACCACTTTTC
AGCCATTTATTAATATGGGGATTTAACTTACTCAAGCAATAGTTGAAGGGAAGGTGCATA
TTATCACGGATGCAATTTATGTTGTGTGCCAGTCTGGTCCCAAACATCAATCTCTTAACA
TGAGCTCCAGTTTACCTAAATGTTCACTGACACAAAGGATTAGATTACACCTACAGTGAC
TCCGCGCGGTCTCGTGTGCAAGGACTGCACGTGGAGTACAGATCCGTAGAATTATCAGGA
ATGCACCTCTGCCTGGGAGGTCCAGTCGCCATATGATTTCTAGCTGCCTCCTCAGTTAGG
AATGAGCTTCTGCCTGTTTGCAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTCAAGTCTTCCAGGTATTTGTTAGTTTAGATACTATGTAACTTTTTCAGGGAATAG
TTTAAGCTTTATTCATTCATGCAATACTAAAGAGAAATAAGAATACTGCAATTTTGTGCT
GGCTTTGAACAATTATGAACACTAATGAAGGACACATGAATCCTGAAGGAAGATTTTTAA
AAAAATGTTTCGTTTCTTCTTACAAATGGAGATTTTTTTGTACCAGCTTTACCACTTTTC
AGCCATTTATTAATATGGGGATTTAACTTACTCAAGCAATAGTTGAAGGGAAGGTGCATA
TTATCACGGATGCAATTTATGTTGTGTGCCAGTCTGGTCCCAAACATCAATCTCTTAACA
TGAGCTCCAGTTTACCTAAATGTTCACTGACACAAAGGATTAGATTACACCTACAGTGAC
TCCGCGCGGTCTCGTGTGCAAGGACTGCACGTGGAGTACAGATCCGTAGAATTATCAGGA
ATGCACCTCTGCCTGGGAGGTCCAGTCGCCATATGATTTCTAGCTGCCTCCTCAGTTAGG
AATGAGCTTCTGCCTGTTTGCAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-564, gnl|bosTau2|chr16 (8358814-8359369)
               

               
               1-564, gnl|Hg17|chr1 (213067838-213067275)
               

               
               1-564, gnl|Mm7|chr1 (187738284-187738843)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-564, gnl|bosTau2|chr16 (8358814-8359369)
               

               
               1-564, gnl|Hg17|chr1 (213067838-213067275)
               

               
               1-564, gnl|Mm7|chr1 (187738284-187738843)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

Help | Less info


               
               sag (0.36543)
               

               
               lyg (0.266205)
               

               
               tes (0.207814)
               

               
               ret (0.128733)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sag (0.36543)
               

               
               lyg (0.266205)
               

               
               tes (0.207814)
               

               
               ret (0.128733)

	1-564, gnl\|bosTau2\|chr16 (8358814-8359369)
	1-564, gnl\|Hg17\|chr1 (213067838-213067275)
	1-564, gnl\|Mm7\|chr1 (187738284-187738843)