Non-Coding RNA Search

Ss1.1-rtes16_o13.5

Sequence:


               
               ATAACGTATGGATAATCTTGGCATGTGGCCAAAAACTCATGGATGCTGAAAAAAGAGTGT
TAGGAAAGTCACTTTCACATAAATCACCTCCACTGGCGTAATCTCCCTGTTACAGCCCGC
TGTTTCACCAGACACCCTGGGTTCACACACCACGGTGTGACACCTTCCACCTAGGCACAG
CACTACTGACGTATTTACCAGGGATCAGGACGGAATTAAACAATATCAAGAACACGGTGA
AAAGGAGATGCTCCTGTGGAAACCTTCAAGGAAAAACAAGACCTCGGACAATGTAGCACT
CAGAATACTGATGAACTGGTGGCTCACCTGAAATCATTTGGGAGATCAGAGTCTTCTCCA
TAGGTTGAATAGATTAAATCAGAATCGTCCTTGCTGATATTTGCAAATGTGGAGTCGTAA
TGTGGCGCATAAGAACTGTAGGGTCCATAATTCAAGTATAACACTGTTGATTAAAAAAAC
AACAAAAATTAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATAACGTATGGATAATCTTGGCATGTGGCCAAAAACTCATGGATGCTGAAAAAAGAGTGT
TAGGAAAGTCACTTTCACATAAATCACCTCCACTGGCGTAATCTCCCTGTTACAGCCCGC
TGTTTCACCAGACACCCTGGGTTCACACACCACGGTGTGACACCTTCCACCTAGGCACAG
CACTACTGACGTATTTACCAGGGATCAGGACGGAATTAAACAATATCAAGAACACGGTGA
AAAGGAGATGCTCCTGTGGAAACCTTCAAGGAAAAACAAGACCTCGGACAATGTAGCACT
CAGAATACTGATGAACTGGTGGCTCACCTGAAATCATTTGGGAGATCAGAGTCTTCTCCA
TAGGTTGAATAGATTAAATCAGAATCGTCCTTGCTGATATTTGCAAATGTGGAGTCGTAA
TGTGGCGCATAAGAACTGTAGGGTCCATAATTCAAGTATAACACTGTTGATTAAAAAAAC
AACAAAAATTAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-287, gnl|bosTau2|chr18 (17908627-17908925)
               

               
               1-287, gnl|Hg17|chr16 (48915066-48915335)
               

               
               1-287, gnl|Mm7|chr8 (86931775-86932073)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-287, gnl|bosTau2|chr18 (17908627-17908925)
               

               
               1-287, gnl|Hg17|chr16 (48915066-48915335)
               

               
               1-287, gnl|Mm7|chr8 (86931775-86932073)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tes (0.207814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	1-287, gnl\|bosTau2\|chr18 (17908627-17908925)
	1-287, gnl\|Hg17\|chr16 (48915066-48915335)
	1-287, gnl\|Mm7\|chr8 (86931775-86932073)