Non-Coding RNA Search

Ss1.1-rtes17_n23.5

Sequence:


               
               GGAAGCGCGGCTGCTGGGTCTGCAGGCGCGATGCCAACGCCGCCGAAGCCTAAAGCGCAG
AGTCGCCCCTTCTGTTTTAGCGTGAAAGGGCGCTAACTGTGACATCTATGACCTTTTTTA
TCATCGCACAAGCCCCAGAGCCATACATTGCCATCACTGGATTTGAAGTCACTGTTACTT
TCTTTTTCATATTTTTGTATTTAGTCAGACTTGACCGATTAATGAAGTGTATATTTTGGC
CTTTGCTTGTAAGTGTTCAGTTTCATCGTTAAAGTTAATTGCTTTTTCTTGCCATAGTGA
GATATTTTGATAAACTCTGTTCTCGAGTTTTCTGAAGCTTTGAAGGAATCTCTCACAGGC
TTGGAGAGGAGGAAGTCTACCCTCTGCTAATGTGCTCCAGGGGAGATTGTCAAGGAAGCA
GGGCAGCCACCGAGCACCTTCTATCAGTAAATGTGGCTGACCCTTCTGTATGGAGAATTC
ACTTAGGTGTAGATCTTCAAAGGAAAAATAAATTTAGAGATCATGGTTAATAAAATGATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAAGCGCGGCTGCTGGGTCTGCAGGCGCGATGCCAACGCCGCCGAAGCCTAAAGCGCAG
AGTCGCCCCTTCTGTTTTAGCGTGAAAGGGCGCTAACTGTGACATCTATGACCTTTTTTA
TCATCGCACAAGCCCCAGAGCCATACATTGCCATCACTGGATTTGAAGTCACTGTTACTT
TCTTTTTCATATTTTTGTATTTAGTCAGACTTGACCGATTAATGAAGTGTATATTTTGGC
CTTTGCTTGTAAGTGTTCAGTTTCATCGTTAAAGTTAATTGCTTTTTCTTGCCATAGTGA
GATATTTTGATAAACTCTGTTCTCGAGTTTTCTGAAGCTTTGAAGGAATCTCTCACAGGC
TTGGAGAGGAGGAAGTCTACCCTCTGCTAATGTGCTCCAGGGGAGATTGTCAAGGAAGCA
GGGCAGCCACCGAGCACCTTCTATCAGTAAATGTGGCTGACCCTTCTGTATGGAGAATTC
ACTTAGGTGTAGATCTTCAAAGGAAAAATAAATTTAGAGATCATGGTTAATAAAATGATA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|21746175|ref|NP_083589.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|21746175|ref|NP_083589.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               89-436, gnl|bosTau2|chr18 (29871214-29871550)
               

               
               89-436, gnl|Hg17|chr16 (65149593-65149948)
               

               
               89-436, gnl|Mm7|chr8 (102857788-102858111)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               89-436, gnl|bosTau2|chr18 (29871214-29871550)
               

               
               89-436, gnl|Hg17|chr16 (65149593-65149948)
               

               
               89-436, gnl|Mm7|chr8 (102857788-102858111)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               tes (0.623441)
               

               
               cte (0.29274)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.623441)
               

               
               cte (0.29274)

	89-436, gnl\|bosTau2\|chr18 (29871214-29871550)
	89-436, gnl\|Hg17\|chr16 (65149593-65149948)
	89-436, gnl\|Mm7\|chr8 (102857788-102858111)