Non-Coding RNA Search

Ss1.1-rtes18_n9.5

Sequence:


               
               ATTAATAGAAAAAAAGCTAAGGTGAATAATGTACTTCTTGATGTTTTAGGCAGGACCAGA
TGATATCCGGAACTTTGATGCCACGTTTACAGAAGAAACAGTTCCATATTCCGTGTGTGT
GTCTTCTGACTATTCCATAGTGAACGCCAGTGTCCTGGAAGCAGATGATGCATTTGTTGG
TTTCTCTTATGCACCTCCTTCGGAAGATTTATTTTTGTGAACAGTTTGCCATCTTGAAAC
CATTGAGCAAAGATAAGCCTATGGATGAGATGGAAACAACTGTTTGTGTGAATATATTCA
AATGTGTTTTAACTAGTGCCTCATTTTTACATGTAATGTTAAAAACTATGAAAAATGTAT
TTTCTGCTGTATGCAAGAAAATAGGGCATTTCAGAGAGCTATGTTTTGAATTCAGATTTG
TATTCTTGTTTATTAAGCTTATTTTTAAACAGAAAATTTAAAAGCTATTGTTCTTAGCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTAATAGAAAAAAAGCTAAGGTGAATAATGTACTTCTTGATGTTTTAGGCAGGACCAGA
TGATATCCGGAACTTTGATGCCACGTTTACAGAAGAAACAGTTCCATATTCCGTGTGTGT
GTCTTCTGACTATTCCATAGTGAACGCCAGTGTCCTGGAAGCAGATGATGCATTTGTTGG
TTTCTCTTATGCACCTCCTTCGGAAGATTTATTTTTGTGAACAGTTTGCCATCTTGAAAC
CATTGAGCAAAGATAAGCCTATGGATGAGATGGAAACAACTGTTTGTGTGAATATATTCA
AATGTGTTTTAACTAGTGCCTCATTTTTACATGTAATGTTAAAAACTATGAAAAATGTAT
TTTCTGCTGTATGCAAGAAAATAGGGCATTTCAGAGAGCTATGTTTTGAATTCAGATTTG
TATTCTTGTTTATTAAGCTTATTTTTAAACAGAAAATTTAAAAGCTATTGTTCTTAGCAT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               9-479, gnl|bosTau2|chr14 (18887320-18886850)
               

               
               9-479, gnl|Hg17|chr8 (67934157-67934622)
               

               
               9-479, gnl|Mm7|chr1 (10041382-10041870)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-479, gnl|bosTau2|chr14 (18887320-18886850)
               

               
               9-479, gnl|Hg17|chr8 (67934157-67934622)
               

               
               9-479, gnl|Mm7|chr1 (10041382-10041870)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               tes (0.623441)
               

               
               liv (0.146284)
               

               
               kid (0.129735)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.623441)
               

               
               liv (0.146284)
               

               
               kid (0.129735)

	9-479, gnl\|bosTau2\|chr14 (18887320-18886850)
	9-479, gnl\|Hg17\|chr8 (67934157-67934622)
	9-479, gnl\|Mm7\|chr1 (10041382-10041870)