Non-Coding RNA Search

Ss1.1-rtes21_a11.5

Sequence:


               
               CGAAGAATCAGCGCCCTTAGGTCTTCGCAGAGTCTCGGGCATAGATGAGGCTGCCAAAGA
CCAGAGCCTTCAGCCTGCGACTCCCAGCATCAAGAAGAGTTTCGAGTTGCTCCCAGAGAG
CGCCGAGGCCTCGGCGGAGCCCCTGCAAGGGAGTCACGTGAGGAGGAAGACGGTGGAGTT
TAACCTGGCCGATCTGTCGGAGGCCCCCGAACATCTCAAAGAACCGAATTTGGAGCCACC
GATGGGCATACACGCTATACTCAAAGACCACCGGGATCCCTACTGGGCCTTGGAAAACAG
GGATGAAGCACACTCCTAGCCCGTTTCCCAAGGGGGATGCTTCACCGGCCTGGTCCCACC
TGCGTGTACACCAGGACACTGATCCAGTCATAGCCATGTGGCTGTCCACACTGAAGAACA
CGTTCCTGTCAGCCTGAACCAAACAGCTTCGCAGAGAACAAAAATCAGTAGTTTCAAGAC
TGCTTGAAGCTTTAAAATGCCTTTTGTACATATAAATTTTTAAAGGCAGAACTGCTGGAA
ACATGTAACACCAAATACCTAATTCAGAACCAGGAGTGCTTAAAATCCTGTCTGAATCCA
ACACACCCAAGCCTTGGTGTCTTTCCCAAACTAAGGAATTTAATTAGTAAATAGATACAA
ATTAAATTCCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGAAGAATCAGCGCCCTTAGGTCTTCGCAGAGTCTCGGGCATAGATGAGGCTGCCAAAGA
CCAGAGCCTTCAGCCTGCGACTCCCAGCATCAAGAAGAGTTTCGAGTTGCTCCCAGAGAG
CGCCGAGGCCTCGGCGGAGCCCCTGCAAGGGAGTCACGTGAGGAGGAAGACGGTGGAGTT
TAACCTGGCCGATCTGTCGGAGGCCCCCGAACATCTCAAAGAACCGAATTTGGAGCCACC
GATGGGCATACACGCTATACTCAAAGACCACCGGGATCCCTACTGGGCCTTGGAAAACAG
GGATGAAGCACACTCCTAGCCCGTTTCCCAAGGGGGATGCTTCACCGGCCTGGTCCCACC
TGCGTGTACACCAGGACACTGATCCAGTCATAGCCATGTGGCTGTCCACACTGAAGAACA
CGTTCCTGTCAGCCTGAACCAAACAGCTTCGCAGAGAACAAAAATCAGTAGTTTCAAGAC
TGCTTGAAGCTTTAAAATGCCTTTTGTACATATAAATTTTTAAAGGCAGAACTGCTGGAA
ACATGTAACACCAAATACCTAATTCAGAACCAGGAGTGCTTAAAATCCTGTCTGAATCCA
ACACACCCAAGCCTTGGTGTCTTTCCCAAACTAAGGAATTTAATTAGTAAATAGATACAA
ATTAAATTCCTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               8-301, gnl|bosTau2|chr29 (31527973-31527677)
               

               
               8-301, gnl|Hg17|chr11 (61486652-61486942)
               

               
               8-301, gnl|Mm7|chr19 (9666800-9666321)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-301, gnl|bosTau2|chr29 (31527973-31527677)
               

               
               8-301, gnl|Hg17|chr11 (61486652-61486942)
               

               
               8-301, gnl|Mm7|chr19 (9666800-9666321)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               tes (0.207814)
               

               
               hyp (0.142837)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)
               

               
               hyp (0.142837)

	8-301, gnl\|bosTau2\|chr29 (31527973-31527677)
	8-301, gnl\|Hg17\|chr11 (61486652-61486942)
	8-301, gnl\|Mm7\|chr19 (9666800-9666321)