Ss1.1-rtes21_g19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACTAAACTAAGAAAAATCGGTCCAAGGTTCAGCACAAAAGGATATTTTCATCCCAGTCCT TTCGCCCACGTAGGGAACTATGCCTTTGGAGGTGGTGGTGGAACTGCAGATCCGGGCGAT TTCTTGCCCAGGGGTGTTCCTTCCTGACAAGCACGATGTGTTCCTTGGTGTTTACCTCCT GAATCAGTACCTAGAGACAGACTGTCTTCCTTCTGTATTCCCTATTATGATTCAGCGGAG CATGAGGTTTGAAAAGGTATTTGAAAATGCAATAGATCCTGGAGCTGTAGCAGACATCTT AGAAAGCTTTCTAACCAGGTTTGAGTTAATACAGCTAGTGCCTCCAGAATGGGAAGAGTT GGCCTACTATGAAGAAAACACACGGGACTTTCTTTTCCCTGAGCCCAGGCTGACACCTTC ACACCCTGGGATGTGTAGAGAGGTACTCATGAAAACAGTTGCAGGTTTTCCAGGCATTGC TCCTAAAATAGAGTTTTCTACGAGGACAGCCATCAGAGAACGAGTGTTTCTGCATAGAAA CAGATTTCTTGAAGAAAGATATAAGTCACAAAGGCCTTTATCAACATCATCTGGACCAAA ATTCCCTTTAAGTAGTGTAAAGATGAAGCTCAGGGAGAGTAATCTCGACAGACTGCCCCA AGGCTTGCAATCCCGGCCATCCTCTCCATATTCCACCAGGCGTTTCTTTCAGGACCAGCC AGCTCATCTGAACCTTGGGAATAATTTCAAAATACCCAGAGAAAGCAGACCTCCATTCGT AGTGGATAGTGCAAAGCCCTTTGGTGAGAACAGTTCAGAGCATCATTCCCAGAAATCTAG AAGAAAATGTAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACTAAACTAAGAAAAATCGGTCCAAGGTTCAGCACAAAAGGATATTTTCATCCCAGTCCT TTCGCCCACGTAGGGAACTATGCCTTTGGAGGTGGTGGTGGAACTGCAGATCCGGGCGAT TTCTTGCCCAGGGGTGTTCCTTCCTGACAAGCACGATGTGTTCCTTGGTGTTTACCTCCT GAATCAGTACCTAGAGACAGACTGTCTTCCTTCTGTATTCCCTATTATGATTCAGCGGAG CATGAGGTTTGAAAAGGTATTTGAAAATGCAATAGATCCTGGAGCTGTAGCAGACATCTT AGAAAGCTTTCTAACCAGGTTTGAGTTAATACAGCTAGTGCCTCCAGAATGGGAAGAGTT GGCCTACTATGAAGAAAACACACGGGACTTTCTTTTCCCTGAGCCCAGGCTGACACCTTC ACACCCTGGGATGTGTAGAGAGGTACTCATGAAAACAGTTGCAGGTTTTCCAGGCATTGC TCCTAAAATAGAGTTTTCTACGAGGACAGCCATCAGAGAACGAGTGTTTCTGCATAGAAA CAGATTTCTTGAAGAAAGATATAAGTCACAAAGGCCTTTATCAACATCATCTGGACCAAA ATTCCCTTTAAGTAGTGTAAAGATGAAGCTCAGGGAGAGTAATCTCGACAGACTGCCCCA AGGCTTGCAATCCCGGCCATCCTCTCCATATTCCACCAGGCGTTTCTTTCAGGACCAGCC AGCTCATCTGAACCTTGGGAATAATTTCAAAATACCCAGAGAAAGCAGACCTCCATTCGT AGTGGATAGTGCAAAGCCCTTTGGTGAGAACAGTTCAGAGCATCATTCCCAGAAATCTAG AAGAAAATGTAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 118-258, gnl|bosTau2|chr8 (18626394-18626534) | |
| 118-258, gnl|canFam2|chr1 (96103111-96103250) | |
| 118-258, gnl|danRer3|chr7 (51042212-51042350) | |
| 118-258, gnl|dasNov1|scaffold_9300 (49909-49771) | |
| 118-258, gnl|echTel1|scaffold_271066 (4168-4028) | |
| 118-258, gnl|hg17|chr9 (4651897-4652035) | |
| 118-258, gnl|Hg17|chr9 (4652037-4651897) | |
| 118-258, gnl|loxAfr1|scaffold_844 (59595-59733) | |
| 118-258, gnl|mm7|chr19 (28663372-28663510) | |
| 118-258, gnl|Mm7|chr19 (28663512-28663372) | |
| 118-258, gnl|monDom2|scaffold_5 (112008076-112007940) | |
| 118-258, gnl|oryCun1|scaffold_187007 (1514-1652) | |
| 118-258, gnl|panTro1|chr11 (4651375-4651513) | |
| 118-258, gnl|rheMac2|chr15 (72549521-72549383) | |
| 118-258, gnl|rn3|chr1 (232762231-232762369) | |
| 350-473, gnl|bosTau2|chr8 (18646669-18646792) | |
| 350-473, gnl|canFam2|chr1 (96084853-96085102) | |
| 350-473, gnl|dasNov1|scaffold_171271 (1197-1461) | |
| 350-473, gnl|hg17|chr9 (4625221-4625460) | |
| 350-473, gnl|Hg17|chr9 (4625397-4625274) | |
| 350-473, gnl|mm7|chr19 (28648405-28648644) | |
| 350-473, gnl|Mm7|chr19 (28648579-28648456) | |
| 350-473, gnl|monDom2|scaffold_5 (112048863-112048609) | |
| 350-473, gnl|oryCun1|scaffold_183511 (625-384) | |
| 350-473, gnl|panTro1|chr11 (4625276-4625515) | |
| 350-473, gnl|rheMac2|chr15 (72570902-72570663) | |
| 350-473, gnl|rn3|chr1 (232749016-232749255) | |
| 545-783, gnl|bosTau2|chr8 (18654308-18654546) | |
| 545-783, gnl|canFam2|chr1 (96075255-96075542) | |
| 545-783, gnl|echTel1|scaffold_99907 (5542-5824) | |
| 545-783, gnl|hg17|chr9 (4615301-4615586) | |
| 545-783, gnl|Hg17|chr9 (4615572-4615334) | |
| 545-783, gnl|loxAfr1|scaffold_844 (40215-40499) | |
| 545-783, gnl|mm7|chr19 (28644028-28644335) | |
| 545-783, gnl|Mm7|chr19 (28644298-28644069) | |
| 545-783, gnl|monDom2|scaffold_5 (112059476-112059175) | |
| 545-783, gnl|panTro1|chr11 (4615360-4615645) | |
| 545-783, gnl|rheMac2|chr15 (72581983-72581696) | |
| 545-783, gnl|rn3|chr1 (232744840-232745139) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 118-258, gnl|bosTau2|chr8 (18626394-18626534) | |
| 118-258, gnl|canFam2|chr1 (96103111-96103250) | |
| 118-258, gnl|danRer3|chr7 (51042212-51042350) | |
| 118-258, gnl|dasNov1|scaffold_9300 (49909-49771) | |
| 118-258, gnl|echTel1|scaffold_271066 (4168-4028) | |
| 118-258, gnl|hg17|chr9 (4651897-4652035) | |
| 118-258, gnl|Hg17|chr9 (4652037-4651897) | |
| 118-258, gnl|loxAfr1|scaffold_844 (59595-59733) | |
| 118-258, gnl|mm7|chr19 (28663372-28663510) | |
| 118-258, gnl|Mm7|chr19 (28663512-28663372) | |
| 118-258, gnl|monDom2|scaffold_5 (112008076-112007940) | |
| 118-258, gnl|oryCun1|scaffold_187007 (1514-1652) | |
| 118-258, gnl|panTro1|chr11 (4651375-4651513) | |
| 118-258, gnl|rheMac2|chr15 (72549521-72549383) | |
| 118-258, gnl|rn3|chr1 (232762231-232762369) | |
| 350-473, gnl|bosTau2|chr8 (18646669-18646792) | |
| 350-473, gnl|canFam2|chr1 (96084853-96085102) | |
| 350-473, gnl|dasNov1|scaffold_171271 (1197-1461) | |
| 350-473, gnl|hg17|chr9 (4625221-4625460) | |
| 350-473, gnl|Hg17|chr9 (4625397-4625274) | |
| 350-473, gnl|mm7|chr19 (28648405-28648644) | |
| 350-473, gnl|Mm7|chr19 (28648579-28648456) | |
| 350-473, gnl|monDom2|scaffold_5 (112048863-112048609) | |
| 350-473, gnl|oryCun1|scaffold_183511 (625-384) | |
| 350-473, gnl|panTro1|chr11 (4625276-4625515) | |
| 350-473, gnl|rheMac2|chr15 (72570902-72570663) | |
| 350-473, gnl|rn3|chr1 (232749016-232749255) | |
| 545-783, gnl|bosTau2|chr8 (18654308-18654546) | |
| 545-783, gnl|canFam2|chr1 (96075255-96075542) | |
| 545-783, gnl|echTel1|scaffold_99907 (5542-5824) | |
| 545-783, gnl|hg17|chr9 (4615301-4615586) | |
| 545-783, gnl|Hg17|chr9 (4615572-4615334) | |
| 545-783, gnl|loxAfr1|scaffold_844 (40215-40499) | |
| 545-783, gnl|mm7|chr19 (28644028-28644335) | |
| 545-783, gnl|Mm7|chr19 (28644298-28644069) | |
| 545-783, gnl|monDom2|scaffold_5 (112059476-112059175) | |
| 545-783, gnl|panTro1|chr11 (4615360-4615645) | |
| 545-783, gnl|rheMac2|chr15 (72581983-72581696) | |
| 545-783, gnl|rn3|chr1 (232744840-232745139) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (0.207814) | |
| nmm (0.132802) |