Non-Coding RNA Search

Ss1.1-rtes23_h11.5

Sequence:


               
               GGACATGCCATTCTTCCCCTTCAGATCTGTTCCTCTTCAAAAACAGCTGCCTCGTGGAAT
GGATGGACGATGTCATTTAGACAGTGATGACATTAAGGTGCCACAAGCCCATCCAAGGGA
AGCATCTGGAACTCGGCAAAGCAAGACCCAGTGCGTGTCTCGCCACATCCTGCAGGCTTA
TCTTGTGGTCCACAGCGTAAACCAAAGAAGGATGAAACCAAGTAAAAAGGATGAGCAGAA
CCCTTAAACCTTTGATCCAACTCTCCATAGTGAAGCTGAGTTGATTCTAAGGAGCCAATT
AAATGACCGTCAAGGCCAAGCTGAGGCCAGGAACTGAGGTGAATTGTGAACCCAACAAAA
GAACAAATTGTACTGATGCACTGGATCTGAAACCAGACCTTATTACAAACTGTTTACGGA
AATGTGACCCCGCTGAAGTCTGAGTGTCCTTTCCAAACACACCTGATGATGCAGTCCAGT
CAAGTAACCAAACCTATATATGTTTAAAAGCTTTGGTACAGGCTCAAAAACTCACATTGC
AAAACAAATCTTAGACTGAACTCAAATGAAACTCAGAGTTCTTTACAGTGAACTGACTAT
GGAAGATACAATAGAAATGCAATAATAAACGTTCTTTTCAAAGTCAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGACATGCCATTCTTCCCCTTCAGATCTGTTCCTCTTCAAAAACAGCTGCCTCGTGGAAT
GGATGGACGATGTCATTTAGACAGTGATGACATTAAGGTGCCACAAGCCCATCCAAGGGA
AGCATCTGGAACTCGGCAAAGCAAGACCCAGTGCGTGTCTCGCCACATCCTGCAGGCTTA
TCTTGTGGTCCACAGCGTAAACCAAAGAAGGATGAAACCAAGTAAAAAGGATGAGCAGAA
CCCTTAAACCTTTGATCCAACTCTCCATAGTGAAGCTGAGTTGATTCTAAGGAGCCAATT
AAATGACCGTCAAGGCCAAGCTGAGGCCAGGAACTGAGGTGAATTGTGAACCCAACAAAA
GAACAAATTGTACTGATGCACTGGATCTGAAACCAGACCTTATTACAAACTGTTTACGGA
AATGTGACCCCGCTGAAGTCTGAGTGTCCTTTCCAAACACACCTGATGATGCAGTCCAGT
CAAGTAACCAAACCTATATATGTTTAAAAGCTTTGGTACAGGCTCAAAAACTCACATTGC
AAAACAAATCTTAGACTGAACTCAAATGAAACTCAGAGTTCTTTACAGTGAACTGACTAT
GGAAGATACAATAGAAATGCAATAATAAACGTTCTTTTCAAAGTCAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               269-638, gnl|bosTau2|chr1 (3131704-3131334)
               

               
               269-638, gnl|Hg17|chr21 (32253869-32253508)
               

               
               269-638, gnl|Mm7|chr16 (90515018-90514495)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               269-638, gnl|bosTau2|chr1 (3131704-3131334)
               

               
               269-638, gnl|Hg17|chr21 (32253869-32253508)
               

               
               269-638, gnl|Mm7|chr16 (90515018-90514495)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               tes (0.415628)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.415628)

	269-638, gnl\|bosTau2\|chr1 (3131704-3131334)
	269-638, gnl\|Hg17\|chr21 (32253869-32253508)
	269-638, gnl\|Mm7\|chr16 (90515018-90514495)