Ss1.1-rtes24_g6.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GACCATGAGCGCTCCGCACCTCGCCAGCCTCGCTTGCCTCCATTCGCATCCCCGCCCCTC CAGCCCGCTCCCTCCGGGCCCCCGCATTCCTGCCGTCTGATTCCTGCCTGAACCGGAGCT CCCAGGATCCCCCTTCCCCGGCAGTTCCGATCCCGCTGATCTCCAGGATATGTTCCGATT TAAGGTGAAACCATGAAGAGAAGATAGAACAAATAATAATGCTTTTCCGAAATCGCTTCT TGCTGCTGCTGGCCCTGGCTGCGCTGCTGGCCTTTGTGAGCCTCAGCCTGCAGTTCTTCC ACCTGATCCCGGTGTCGGTAGCTAAGAATGGAGTGAATGGCAAGAGTCGAAAGAGAATCA TGCCCGACCCGGTGACGGAGCCCCCTGTGATGGACCCTGTTTACGAAGCTCTTCTGTACT GCAACATTCCAAGTGTGGCCGAGCGCAGCATGGAAGGTCACGCTCCGCATCATTTTAAGC TGGTCTCCGTGCACGTGTTTATCCGACACGGAGACAGGTACCCACTGTATGTCATTCCCA AAACCAAGCGCCCAGAAATTGACT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GACCATGAGCGCTCCGCACCTCGCCAGCCTCGCTTGCCTCCATTCGCATCCCCGCCCCTC CAGCCCGCTCCCTCCGGGCCCCCGCATTCCTGCCGTCTGATTCCTGCCTGAACCGGAGCT CCCAGGATCCCCCTTCCCCGGCAGTTCCGATCCCGCTGATCTCCAGGATATGTTCCGATT TAAGGTGAAACCATGAAGAGAAGATAGAACAAATAATAATGCTTTTCCGAAATCGCTTCT TGCTGCTGCTGGCCCTGGCTGCGCTGCTGGCCTTTGTGAGCCTCAGCCTGCAGTTCTTCC ACCTGATCCCGGTGTCGGTAGCTAAGAATGGAGTGAATGGCAAGAGTCGAAAGAGAATCA TGCCCGACCCGGTGACGGAGCCCCCTGTGATGGACCCTGTTTACGAAGCTCTTCTGTACT GCAACATTCCAAGTGTGGCCGAGCGCAGCATGGAAGGTCACGCTCCGCATCATTTTAAGC TGGTCTCCGTGCACGTGTTTATCCGACACGGAGACAGGTACCCACTGTATGTCATTCCCA AAACCAAGCGCCCAGAAATTGACT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
| 164-297, gnl|bosTau2|chr1 (79898759-79898625) | |
| 164-297, gnl|canFam2|chr23 (40216567-40216714) | |
| 164-297, gnl|dasNov1|scaffold_14648 (85398-85251) | |
| 164-297, gnl|echTel1|scaffold_295506 (9122-9271) | |
| 164-297, gnl|hg17|chr3 (142461653-142461802) | |
| 164-297, gnl|Hg17|chr3 (142461660-142461794) | |
| 164-297, gnl|loxAfr1|scaffold_9689 (62681-62531) | |
| 164-297, gnl|mm7|chr9 (96498154-96498005) | |
| 164-297, gnl|Mm7|chr9 (96498145-96498011) | |
| 164-297, gnl|monDom2|scaffold_24 (38097471-38097618) | |
| 164-297, gnl|oryCun1|scaffold_208690 (58415-58266) | |
| 164-297, gnl|panTro1|chr2 (144997489-144997638) | |
| 164-297, gnl|rheMac2|chr2 (146581438-146581289) | |
| 164-297, gnl|rn3|chr8 (101970179-101970030) | |
| 164-297, gnl|xenTro1|scaffold_907 (277010-276859) | |
| 298-458, gnl|bosTau2|chr1 (79876921-79876761) | |
| 298-458, gnl|canFam2|chr23 (40233877-40234078) | |
| 298-458, gnl|danRer3|chrNA (75913110-75913312) | |
| 298-458, gnl|dasNov1|scaffold_63401 (2241-2049) | |
| 298-458, gnl|echTel1|scaffold_286365 (37891-38085) | |
| 298-458, gnl|fr1|chrUn (288431231-288431444) | |
| 298-458, gnl|hg17|chr3 (142479851-142480049) | |
| 298-458, gnl|Hg17|chr3 (142479882-142480042) | |
| 298-458, gnl|loxAfr1|scaffold_43747 (7129-6938) | |
| 298-458, gnl|mm7|chr9 (96481787-96481577) | |
| 298-458, gnl|Mm7|chr9 (96481760-96481600) | |
| 298-458, gnl|monDom2|scaffold_24 (38104761-38104941) | |
| 298-458, gnl|panTro1|chr2 (145016067-145016265) | |
| 298-458, gnl|rheMac2|chr2 (146562867-146562669) | |
| 298-458, gnl|rn3|chr8 (101953799-101953589) |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 164-297, gnl|bosTau2|chr1 (79898759-79898625) | |
| 164-297, gnl|canFam2|chr23 (40216567-40216714) | |
| 164-297, gnl|dasNov1|scaffold_14648 (85398-85251) | |
| 164-297, gnl|echTel1|scaffold_295506 (9122-9271) | |
| 164-297, gnl|hg17|chr3 (142461653-142461802) | |
| 164-297, gnl|Hg17|chr3 (142461660-142461794) | |
| 164-297, gnl|loxAfr1|scaffold_9689 (62681-62531) | |
| 164-297, gnl|mm7|chr9 (96498154-96498005) | |
| 164-297, gnl|Mm7|chr9 (96498145-96498011) | |
| 164-297, gnl|monDom2|scaffold_24 (38097471-38097618) | |
| 164-297, gnl|oryCun1|scaffold_208690 (58415-58266) | |
| 164-297, gnl|panTro1|chr2 (144997489-144997638) | |
| 164-297, gnl|rheMac2|chr2 (146581438-146581289) | |
| 164-297, gnl|rn3|chr8 (101970179-101970030) | |
| 164-297, gnl|xenTro1|scaffold_907 (277010-276859) | |
| 298-458, gnl|bosTau2|chr1 (79876921-79876761) | |
| 298-458, gnl|canFam2|chr23 (40233877-40234078) | |
| 298-458, gnl|danRer3|chrNA (75913110-75913312) | |
| 298-458, gnl|dasNov1|scaffold_63401 (2241-2049) | |
| 298-458, gnl|echTel1|scaffold_286365 (37891-38085) | |
| 298-458, gnl|fr1|chrUn (288431231-288431444) | |
| 298-458, gnl|hg17|chr3 (142479851-142480049) | |
| 298-458, gnl|Hg17|chr3 (142479882-142480042) | |
| 298-458, gnl|loxAfr1|scaffold_43747 (7129-6938) | |
| 298-458, gnl|mm7|chr9 (96481787-96481577) | |
| 298-458, gnl|Mm7|chr9 (96481760-96481600) | |
| 298-458, gnl|monDom2|scaffold_24 (38104761-38104941) | |
| 298-458, gnl|panTro1|chr2 (145016067-145016265) | |
| 298-458, gnl|rheMac2|chr2 (146562867-146562669) | |
| 298-458, gnl|rn3|chr8 (101953799-101953589) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (0.207814) | |
| nmm (0.132802) |