Non-Coding RNA Search

Ss1.1-rtes24_m23.5

Sequence:


               
               GATGTCAAGCTTTACTGTCTTCGACCGTCTCTCAGAAGTTTGGAGAGGAAAGCCATCCGA
GCCATAGAAGATGAAAAGAGAGAGCTTGCCAAATTAAGAAGAACAACAAATAGAATTCTG
GCTTCCTCTTGCTGTAGCAGTAATATTTTAGGATCGGTAAACGTGTGCGGCTTTGAACCT
GATCAAGTCAAGGTTCGCGTGAAGGACGGAAAGGTGTGTGTGTCAGCCGAGCGCGAGAAC
AGATACGACTGCCTGGGATCGAAAAAGTACAGCTACATGAACATCTGCAAAGAGTTCAGC
TTGCCCCCTTGTGTGGACGAGAAGGACGTGACGTACTCCTATGGGCTCGGCAGCTGTGTC
AAGATCGAGTCTCCCTGCTACCCTTGCACGTCTCCCTGCAACCCCTGTAACCCCTGTAGC
CCCTGCAACCCCTGCAACCCCTGCAACCCCTGCAACCCCTGCAGCCCCTGCAGCCCCTGC
AGCCCCTGCAACCCCTGTGACCCCTGCAACCCATGCTATCCCTGTGGGAGCCGGTTTTCC
TGTAGGAAGATGATTTTGTAAAGTGTAGGAACCCAGGACCTAGTAAAAGTCAGGTATCCA
GCCAGGCAGCTCTTCCAGTGTTTCTGTCCCCCTCCCCACAGTCCCTGTTACTCAACAACT
TAGGAAACTGAATACATAACTGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATGTCAAGCTTTACTGTCTTCGACCGTCTCTCAGAAGTTTGGAGAGGAAAGCCATCCGA
GCCATAGAAGATGAAAAGAGAGAGCTTGCCAAATTAAGAAGAACAACAAATAGAATTCTG
GCTTCCTCTTGCTGTAGCAGTAATATTTTAGGATCGGTAAACGTGTGCGGCTTTGAACCT
GATCAAGTCAAGGTTCGCGTGAAGGACGGAAAGGTGTGTGTGTCAGCCGAGCGCGAGAAC
AGATACGACTGCCTGGGATCGAAAAAGTACAGCTACATGAACATCTGCAAAGAGTTCAGC
TTGCCCCCTTGTGTGGACGAGAAGGACGTGACGTACTCCTATGGGCTCGGCAGCTGTGTC
AAGATCGAGTCTCCCTGCTACCCTTGCACGTCTCCCTGCAACCCCTGTAACCCCTGTAGC
CCCTGCAACCCCTGCAACCCCTGCAACCCCTGCAACCCCTGCAGCCCCTGCAGCCCCTGC
AGCCCCTGCAACCCCTGTGACCCCTGCAACCCATGCTATCCCTGTGGGAGCCGGTTTTCC
TGTAGGAAGATGATTTTGTAAAGTGTAGGAACCCAGGACCTAGTAAAAGTCAGGTATCCA
GCCAGGCAGCTCTTCCAGTGTTTCTGTCCCCCTCCCCACAGTCCCTGTTACTCAACAACT
TAGGAAACTGAATACATAACTGCA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|538267|gb|AAA67872.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|538267|gb|AAA67872.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               89-684, gnl|bosTau2|chr14 (36420887-36421482)
               

               
               89-684, gnl|Hg17|chr8 (103641852-103642416)
               

               
               89-684, gnl|Mm7|chr15 (38336819-38337417)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               89-684, gnl|bosTau2|chr14 (36420887-36421482)
               

               
               89-684, gnl|Hg17|chr8 (103641852-103642416)
               

               
               89-684, gnl|Mm7|chr15 (38336819-38337417)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               tes (2.07814)
               

               
               cte (0.29274)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (2.07814)
               

               
               cte (0.29274)

	89-684, gnl\|bosTau2\|chr14 (36420887-36421482)
	89-684, gnl\|Hg17\|chr8 (103641852-103642416)
	89-684, gnl\|Mm7\|chr15 (38336819-38337417)