Non-Coding RNA Search

Ss1.1-rtes25_e23.5

Sequence:


               
               AAAATGTCATCTCCATCTTCTGCCTGGGACGTCATCATAGATTATCTCTCTCTGAGCTCG
ATATGGAAGTATCTACAAGCAACTCTTATGGGAGAGACTAGTGTGCCTCAGCAAACAAAT
TTGGGGCGGCTAGATAATCTTGCTCCAGCTGTGCAAGTTCTCCTGGGGATTTCCTTTTTG
ATTTTATTGGGAATAGGAGTATATGCCTTATGGAAACGAAGTGTTCAGTCAATTCAGAAA
ATATTGTTGTTTATAATCACACTCTACAAACTTTACAAGAAAGGCTCAGATTTTTTTCAG
GCTTTGCTGGTCAGCCCAGAAGGGAGTGCTCTCCCGGTTCAAGACAATATCTTCCTATCA
TTGGGCCTGCAAGAGAAAATTCTGAAAAAGCTTCAGATGGTGGAAAACAAAGTGAAAGAC
CTGGAGGGGATGATCATTTCCCAAAAACCTACCACAAAGAGGGACTGTTCCTCTGAGCCC
TACTGCAGCTGCTCCGACTGTCAGAGCCCCTTGCCGACATCAGGGTTTACATCCACATCT
GAAATGTGATGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAATGTCATCTCCATCTTCTGCCTGGGACGTCATCATAGATTATCTCTCTCTGAGCTCG
ATATGGAAGTATCTACAAGCAACTCTTATGGGAGAGACTAGTGTGCCTCAGCAAACAAAT
TTGGGGCGGCTAGATAATCTTGCTCCAGCTGTGCAAGTTCTCCTGGGGATTTCCTTTTTG
ATTTTATTGGGAATAGGAGTATATGCCTTATGGAAACGAAGTGTTCAGTCAATTCAGAAA
ATATTGTTGTTTATAATCACACTCTACAAACTTTACAAGAAAGGCTCAGATTTTTTTCAG
GCTTTGCTGGTCAGCCCAGAAGGGAGTGCTCTCCCGGTTCAAGACAATATCTTCCTATCA
TTGGGCCTGCAAGAGAAAATTCTGAAAAAGCTTCAGATGGTGGAAAACAAAGTGAAAGAC
CTGGAGGGGATGATCATTTCCCAAAAACCTACCACAAAGAGGGACTGTTCCTCTGAGCCC
TACTGCAGCTGCTCCGACTGTCAGAGCCCCTTGCCGACATCAGGGTTTACATCCACATCT
GAAATGTGATGG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|62649580|ref|XP_575903.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|62649580|ref|XP_575903.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               222-552, gnl|bosTau2|chr3 (67814406-67814739)
               

               
               222-552, gnl|Hg17|chr1 (40386032-40386369)
               

               
               222-552, gnl|Mm7|chr4 (120546048-120545712)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               222-552, gnl|bosTau2|chr3 (67814406-67814739)
               

               
               222-552, gnl|Hg17|chr1 (40386032-40386369)
               

               
               222-552, gnl|Mm7|chr4 (120546048-120545712)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               tes (1.24688)
               

               
               cte (0.29274)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (1.24688)
               

               
               cte (0.29274)

	222-552, gnl\|bosTau2\|chr3 (67814406-67814739)
	222-552, gnl\|Hg17\|chr1 (40386032-40386369)
	222-552, gnl\|Mm7\|chr4 (120546048-120545712)