Ss1.1-rtes25_g4.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGAATTGAGGCAAATGGAGCTAATTAAGGATCAATATCAGAAAAAAAACTATGAACAGTC ACTGAGTATCCAGAAATTTGTATCTGAAATGACTAACCTACAGAAGGAGATGCAGTTGTT GGCCAAGAGCCAATACGATACCTCAGCACGGAATAAACAGCAAGAGCTACGACTTGAACT AGAGCGGAAAGTAAGGCAAGAGCTGGAGCATCGGTGCCAGGAATTGGAAGAAACTGTCAG ACACCTGAAGAAATGTAAAGAGGCAACAGAGAATAAACTGAAAGAAGCCAGTGTGGAATC AGAACAGATAACAGCTAACCTGGAGGAAGCTCACCGCTGGTTTAAGTGCAGGTTCGATGG GCTACAACTTGAGCTGACCAAAAACCGGTTGCAGAGGCTTCCCCGGGAAGACAGGTGGCT GGAAGAGGACCAAGATAAAAGTCACGATAACATGTCCAGCCAGTCTGCTCTACATCGATG GGAGAATAAACAGAATCTTAGGCTTGTGCCCAAGAAGTGTCACTCTGAATTAGAGAAAAA GTGATATCCTTGACAGAGGAGCTTCTTCTTCACCATGGTTCCCTGGCCCCAGCAACTAGG GCTGGCCTGTTTCCACAGTCATCAGAACATGAAGTCTTTGATGTGGACTGAAGATTTTGG ACCTGAGTTTATGCTTTTATGAACTCTTTGATATCAGTACAGAACTACCCCATCTTTTTT GTCTCTTTCCCCATTTTTCACCCAATAAATTTATAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGAATTGAGGCAAATGGAGCTAATTAAGGATCAATATCAGAAAAAAAACTATGAACAGTC ACTGAGTATCCAGAAATTTGTATCTGAAATGACTAACCTACAGAAGGAGATGCAGTTGTT GGCCAAGAGCCAATACGATACCTCAGCACGGAATAAACAGCAAGAGCTACGACTTGAACT AGAGCGGAAAGTAAGGCAAGAGCTGGAGCATCGGTGCCAGGAATTGGAAGAAACTGTCAG ACACCTGAAGAAATGTAAAGAGGCAACAGAGAATAAACTGAAAGAAGCCAGTGTGGAATC AGAACAGATAACAGCTAACCTGGAGGAAGCTCACCGCTGGTTTAAGTGCAGGTTCGATGG GCTACAACTTGAGCTGACCAAAAACCGGTTGCAGAGGCTTCCCCGGGAAGACAGGTGGCT GGAAGAGGACCAAGATAAAAGTCACGATAACATGTCCAGCCAGTCTGCTCTACATCGATG GGAGAATAAACAGAATCTTAGGCTTGTGCCCAAGAAGTGTCACTCTGAATTAGAGAAAAA GTGATATCCTTGACAGAGGAGCTTCTTCTTCACCATGGTTCCCTGGCCCCAGCAACTAGG GCTGGCCTGTTTCCACAGTCATCAGAACATGAAGTCTTTGATGTGGACTGAAGATTTTGG ACCTGAGTTTATGCTTTTATGAACTCTTTGATATCAGTACAGAACTACCCCATCTTTTTT GTCTCTTTCCCCATTTTTCACCCAATAAATTTATAT |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 55-221, gnl|bosTau2|chr2 (53528874-53529040) | |
| 55-221, gnl|canFam2|chr37 (9332577-9332850) | |
| 55-221, gnl|dasNov1|scaffold_8294 (2833-3122) | |
| 55-221, gnl|hg17|chr2 (197420122-197420408) | |
| 55-221, gnl|Hg17|chr2 (197420183-197420349) | |
| 55-221, gnl|mm7|chr1 (54597693-54597965) | |
| 55-221, gnl|Mm7|chr1 (54597742-54597908) | |
| 55-221, gnl|monDom2|scaffold_2 (106390801-106391085) | |
| 55-221, gnl|oryCun1|scaffold_214957 (43642-43356) | |
| 55-221, gnl|panTro1|chr13 (87361538-87361824) | |
| 55-221, gnl|rheMac2|chr12 (60361861-60362146) | |
| 55-221, gnl|rn3|chr9 (53170973-53171247) | |
| 423-756, gnl|bosTau2|chr2 (53535614-53535969) | |
| 423-756, gnl|canFam2|chr37 (9335981-9336538) | |
| 423-756, gnl|dasNov1|scaffold_8294 (7165-7662) | |
| 423-756, gnl|echTel1|scaffold_318393 (36929-36473) | |
| 423-756, gnl|hg17|chr2 (197422504-197423003) | |
| 423-756, gnl|Hg17|chr2 (197422671-197423011) | |
| 423-756, gnl|mm7|chr1 (54600843-54601281) | |
| 423-756, gnl|Mm7|chr1 (54600994-54601289) | |
| 423-756, gnl|monDom2|scaffold_2 (106404335-106404850) | |
| 423-756, gnl|oryCun1|scaffold_214957 (38525-38021) | |
| 423-756, gnl|panTro1|chr13 (87363917-87364416) | |
| 423-756, gnl|rheMac2|chr12 (60364235-60364735) | |
| 423-756, gnl|rn3|chr9 (53174055-53174526) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 55-221, gnl|bosTau2|chr2 (53528874-53529040) | |
| 55-221, gnl|canFam2|chr37 (9332577-9332850) | |
| 55-221, gnl|dasNov1|scaffold_8294 (2833-3122) | |
| 55-221, gnl|hg17|chr2 (197420122-197420408) | |
| 55-221, gnl|Hg17|chr2 (197420183-197420349) | |
| 55-221, gnl|mm7|chr1 (54597693-54597965) | |
| 55-221, gnl|Mm7|chr1 (54597742-54597908) | |
| 55-221, gnl|monDom2|scaffold_2 (106390801-106391085) | |
| 55-221, gnl|oryCun1|scaffold_214957 (43642-43356) | |
| 55-221, gnl|panTro1|chr13 (87361538-87361824) | |
| 55-221, gnl|rheMac2|chr12 (60361861-60362146) | |
| 55-221, gnl|rn3|chr9 (53170973-53171247) | |
| 423-756, gnl|bosTau2|chr2 (53535614-53535969) | |
| 423-756, gnl|canFam2|chr37 (9335981-9336538) | |
| 423-756, gnl|dasNov1|scaffold_8294 (7165-7662) | |
| 423-756, gnl|echTel1|scaffold_318393 (36929-36473) | |
| 423-756, gnl|hg17|chr2 (197422504-197423003) | |
| 423-756, gnl|Hg17|chr2 (197422671-197423011) | |
| 423-756, gnl|mm7|chr1 (54600843-54601281) | |
| 423-756, gnl|Mm7|chr1 (54600994-54601289) | |
| 423-756, gnl|monDom2|scaffold_2 (106404335-106404850) | |
| 423-756, gnl|oryCun1|scaffold_214957 (38525-38021) | |
| 423-756, gnl|panTro1|chr13 (87363917-87364416) | |
| 423-756, gnl|rheMac2|chr12 (60364235-60364735) | |
| 423-756, gnl|rn3|chr9 (53174055-53174526) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| tes (0.415628) | |
| elu (0.385356) | |
| cte (0.29274) | |
| cmu (0.186393) | |
| kid (0.129735) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (0.415628) | |
| elu (0.385356) | |
| cte (0.29274) | |
| cmu (0.186393) | |
| kid (0.129735) |