Non-Coding RNA Search

Ss1.1-rtes25_h13.5

Sequence:


               
               GAACAGACCTGAGAGCGATGGAAACATCTAGCCCCTAACCATGGGCCCCAAAGCGAGAGT
TGCGCTATCAGCAGAACAAAAGGCAGCTGTGTTCATCCAAGCTTGGTGGCGGGGCACCCT
GGTGCGCCGGACGCTGCTGCATGCAGCTCTCAGAGCATGTATCATTCAGTGCTGGTGGAA
ACAGAAACTGGCAAAGCTGCTGGAGAAGAGGCGGCGGATGTCCCTAGAGTCCTACGCGCG
ACAAGAATGGGCTGTTGTTAAGCTACAATCCTGGGTCCGTATGTGGTGCATCCGCCTCCG
TTACTGCCGTTTGCTCCATGCTGTCCGCATTATCCAGGTCTACTGGCGCTGGCATAGTTG
CCATACCCGTGGCTTTATACAGGGCCATTACGACCTCAAAGAAAACCAACTGAATCTTCA
ACTTGAAATCTCTTTGGGCTCACAAGCTTGCAGAGTACAACAATGCATACCCCTTCCAAT
AAAGGAATGACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAACAGACCTGAGAGCGATGGAAACATCTAGCCCCTAACCATGGGCCCCAAAGCGAGAGT
TGCGCTATCAGCAGAACAAAAGGCAGCTGTGTTCATCCAAGCTTGGTGGCGGGGCACCCT
GGTGCGCCGGACGCTGCTGCATGCAGCTCTCAGAGCATGTATCATTCAGTGCTGGTGGAA
ACAGAAACTGGCAAAGCTGCTGGAGAAGAGGCGGCGGATGTCCCTAGAGTCCTACGCGCG
ACAAGAATGGGCTGTTGTTAAGCTACAATCCTGGGTCCGTATGTGGTGCATCCGCCTCCG
TTACTGCCGTTTGCTCCATGCTGTCCGCATTATCCAGGTCTACTGGCGCTGGCATAGTTG
CCATACCCGTGGCTTTATACAGGGCCATTACGACCTCAAAGAAAACCAACTGAATCTTCA
ACTTGAAATCTCTTTGGGCTCACAAGCTTGCAGAGTACAACAATGCATACCCCTTCCAAT
AAAGGAATGACC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|41193279|ref|XP_371643.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|41193279|ref|XP_371643.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               44-492, gnl|bosTau2|chr22 (36431068-36430620)
               

               
               44-492, gnl|Hg17|chr3 (51883232-51882787)
               

               
               44-492, gnl|Mm7|chr9 (106244997-106245442)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               44-492, gnl|bosTau2|chr22 (36431068-36430620)
               

               
               44-492, gnl|Hg17|chr3 (51883232-51882787)
               

               
               44-492, gnl|Mm7|chr9 (106244997-106245442)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tes (0.623441)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.623441)

	44-492, gnl\|bosTau2\|chr22 (36431068-36430620)
	44-492, gnl\|Hg17\|chr3 (51883232-51882787)
	44-492, gnl\|Mm7\|chr9 (106244997-106245442)