Ss1.1-rtes26_m7.5
|
GAACAAGAGAGATCAAAAAGATTTGAGAAGGTTTATACTCATAACCTGTATTACCTGGCT
CAAGTCTACCAGCACATGGAAATGTTTGAGAAGGCTGCTCATTATTGCCACAGTACCCTA
AAACGCCAGCTTGAGCACAACGCATACCATCCTATGGAGTGGGCTATTAATGCTGCTACC
TTGTCACAATTTTACATCAATAAGCAATGCTTTATGGAGGCCAGGCATTGTTTATCAGCT
GCTAATGTCATTTTTGGTCAAACTGGAAAGATCTCAACCATGGAAGACACTACTGAAGCT
GAAGGAGATGTGCCAGAGCTTTATCATCAAAGAAAAGGAGAAATAGCAAGATGCTGGATC
AAATATTGTTTGACTCTCATGCAGAATGCCCAACTTTCCATGCAGGACAACATAGGAGAG
CTTGATCTTGATAAACAATCTGAACTTAGAGCTTTAAGGAAAAAAGAACTAGATGAGGAA
GAAAGTGTTAGGAAAAAAGCTGTGCAGTTTGGAACCGGTGAACTGTGTGATGCCATCTCT
GCAGTGGAAGAGAAAGTCAGCTACTTGAGACCTTTATATGTTGAAGAAGCCAGAGAGCTT |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GAACAAGAGAGATCAAAAAGATTTGAGAAGGTTTATACTCATAACCTGTATTACCTGGCT
CAAGTCTACCAGCACATGGAAATGTTTGAGAAGGCTGCTCATTATTGCCACAGTACCCTA
AAACGCCAGCTTGAGCACAACGCATACCATCCTATGGAGTGGGCTATTAATGCTGCTACC
TTGTCACAATTTTACATCAATAAGCAATGCTTTATGGAGGCCAGGCATTGTTTATCAGCT
GCTAATGTCATTTTTGGTCAAACTGGAAAGATCTCAACCATGGAAGACACTACTGAAGCT
GAAGGAGATGTGCCAGAGCTTTATCATCAAAGAAAAGGAGAAATAGCAAGATGCTGGATC
AAATATTGTTTGACTCTCATGCAGAATGCCCAACTTTCCATGCAGGACAACATAGGAGAG
CTTGATCTTGATAAACAATCTGAACTTAGAGCTTTAAGGAAAAAAGAACTAGATGAGGAA
GAAAGTGTTAGGAAAAAAGCTGTGCAGTTTGGAACCGGTGAACTGTGTGATGCCATCTCT
GCAGTGGAAGAGAAAGTCAGCTACTTGAGACCTTTATATGTTGAAGAAGCCAGAGAGCTT |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
19-211, gnl|bosTau2|chr28 (16392552-16392360) |
|
19-211, gnl|Hg17|chr10 (70435492-70435684) |
|
19-211, gnl|Mm7|chr10 (62088432-62088241) |
| |
|
395-600, gnl|bosTau2|chr28 (16376647-16376442) |
|
395-600, gnl|canFam2|chr4 (23382877-23383042) |
|
395-600, gnl|danRer3|chr13 (26687842-26687657) |
|
395-600, gnl|fr1|chrUn (220525988-220526147) |
|
395-600, gnl|galGal2|chr6 (10107405-10107572) |
|
395-600, gnl|hg17|chr10 (70445291-70445458) |
|
395-600, gnl|Hg17|chr10 (70445290-70445497) |
|
395-600, gnl|loxAfr1|scaffold_6159 (21355-21522) |
|
395-600, gnl|mm7|chr10 (62078683-62078518) |
|
395-600, gnl|Mm7|chr10 (62078682-62078477) |
|
395-600, gnl|monDom2|scaffold_242 (374426-374261) |
|
395-600, gnl|oryCun1|scaffold_146704 (4425-4260) |
|
395-600, gnl|panTro1|chr8 (71598535-71598702) |
|
395-600, gnl|rheMac2|chr9 (68002354-68002188) |
|
395-600, gnl|rn3|chr20 (29832476-29832312) |
|
395-600, gnl|tetNig1|chr5 (3769421-3769247) |
|
395-600, gnl|xenTro1|scaffold_228 (471423-471252) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
19-211, gnl|bosTau2|chr28 (16392552-16392360) |
|
19-211, gnl|Hg17|chr10 (70435492-70435684) |
|
19-211, gnl|Mm7|chr10 (62088432-62088241) |
| |
|
395-600, gnl|bosTau2|chr28 (16376647-16376442) |
|
395-600, gnl|canFam2|chr4 (23382877-23383042) |
|
395-600, gnl|danRer3|chr13 (26687842-26687657) |
|
395-600, gnl|fr1|chrUn (220525988-220526147) |
|
395-600, gnl|galGal2|chr6 (10107405-10107572) |
|
395-600, gnl|hg17|chr10 (70445291-70445458) |
|
395-600, gnl|Hg17|chr10 (70445290-70445497) |
|
395-600, gnl|loxAfr1|scaffold_6159 (21355-21522) |
|
395-600, gnl|mm7|chr10 (62078683-62078518) |
|
395-600, gnl|Mm7|chr10 (62078682-62078477) |
|
395-600, gnl|monDom2|scaffold_242 (374426-374261) |
|
395-600, gnl|oryCun1|scaffold_146704 (4425-4260) |
|
395-600, gnl|panTro1|chr8 (71598535-71598702) |
|
395-600, gnl|rheMac2|chr9 (68002354-68002188) |
|
395-600, gnl|rn3|chr20 (29832476-29832312) |
|
395-600, gnl|tetNig1|chr5 (3769421-3769247) |
|
395-600, gnl|xenTro1|scaffold_228 (471423-471252) |
|
tes (0.207814) |
|
lun (0.150489) |
|
ova (0.129132) |
|
tes (0.207814) |
|
lun (0.150489) |
|
ova (0.129132) |
