Non-Coding RNA Search

Ss1.1-rtes27_b19.5

Sequence:


               
               GTTGACTGCAAATGGGAACAGAGAGAAAGAGAGGCAGACCTAAAACTCAGAGTAAAAGAG
CCCCAAAGAAAAGAGGCAGACCAAGAGGGAAAAAAACAGCCAACACTGGGCCTCGGAAAA
AAGGCAGAAAAAGAGGTCCAAGAATTCCCAGAGTAGAAAATATGGATTTTCAAAGTCCTC
AACTTCCCGTGACATGCGGTCCAGCAGAGGGGGTTTTATATAAGAAGAAAATGGAACAAG
GCATCTGGCAGAAGTGTATAAAGAGCAAGAATGGAAAATGGTTCACCCTCAAGGAATTTG
AAGCTGAAGGAAAGCATGACGCATCCAAGAACTGGAAGATGAGTGTGCGCTGCGGTGGAT
GGCCCCTAAAAATCCTGATTGAGAATAGACATCTACCAGTCCCTCCAAGAAAAAGAAAAA
AAGAAACCTCAGGTAAATGTGCAGTGTGCGAAGGAGAGGAAGAACTGTTCTCCTGTGATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTGACTGCAAATGGGAACAGAGAGAAAGAGAGGCAGACCTAAAACTCAGAGTAAAAGAG
CCCCAAAGAAAAGAGGCAGACCAAGAGGGAAAAAAACAGCCAACACTGGGCCTCGGAAAA
AAGGCAGAAAAAGAGGTCCAAGAATTCCCAGAGTAGAAAATATGGATTTTCAAAGTCCTC
AACTTCCCGTGACATGCGGTCCAGCAGAGGGGGTTTTATATAAGAAGAAAATGGAACAAG
GCATCTGGCAGAAGTGTATAAAGAGCAAGAATGGAAAATGGTTCACCCTCAAGGAATTTG
AAGCTGAAGGAAAGCATGACGCATCCAAGAACTGGAAGATGAGTGTGCGCTGCGGTGGAT
GGCCCCTAAAAATCCTGATTGAGAATAGACATCTACCAGTCCCTCCAAGAAAAAGAAAAA
AAGAAACCTCAGGTAAATGTGCAGTGTGCGAAGGAGAGGAAGAACTGTTCTCCTGTGATA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               239-383, gnl|bosTau2|chr2 (70602869-70602725)
               

               
               239-383, gnl|Hg17|chr2 (231196521-231196665)
               

               
               239-383, gnl|Mm7|chr1 (85600332-85600476)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               239-383, gnl|bosTau2|chr2 (70602869-70602725)
               

               
               239-383, gnl|Hg17|chr2 (231196521-231196665)
               

               
               239-383, gnl|Mm7|chr1 (85600332-85600476)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               tes (0.415628)
               

               
               cte (0.29274)
               

               
               sin (0.174948)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.415628)
               

               
               cte (0.29274)
               

               
               sin (0.174948)

	239-383, gnl\|bosTau2\|chr2 (70602869-70602725)
	239-383, gnl\|Hg17\|chr2 (231196521-231196665)
	239-383, gnl\|Mm7\|chr1 (85600332-85600476)