Non-Coding RNA Search

Ss1.1-rtes27_d8.5

Sequence:


               
               AAAATGCTTTAGAAATTTAACTTCGGAGAGCCGTATTCTGCAGCTTCATCCCTCCCCCCC
CCCCCCCGAGGAAAAAAAAGACCACCACCACTCTTATCACCGCCCCAGCCCTACACACAT
GAACTGAGTCAAAAATCGAAAACCAGACCAACCAAAAGGTGAAATTCTCGGGTAGCGAAG
CTAATTGTTCTGTGTGTTTAATTCCGTTTTCCTTCTAAGTCTCGCCCACACCCCATCCAA
GTCCTCTTTGATTTATTTTCCCTTTTCCAATGAGACTCCGATGGCTGCTCTCCTTAGCCA
AAAAGTGGGTGGGAACACAGCTGAAGGGCTTGGTGGGTGGGTGCTTGTTTAGGTGAAGTC
CAAGTTTTCCAGGGATCAGGCCTGAAGGGTTGGGTGGGGGTCTTGAGGGAGAGAGAGCCG
CAGTCTTTGAGCCGACTAAAAGGCAGAAATTACGGGCTCCGAAATAAATATTTTATTCTA
AGAAAACAAAACCGTTTTAAACAGGTTTTTCTCTTTCCATTTTTGCTCTTACATCTAAGA
TCTTGAGAACAGACTATTTCAAAATAAGCTTTTCCCCTCACTCATAAAACTTGCCCTTTT
ATTTATTTTTGAGCGTTTTATTTTTAACTATCTACTGATTTTTTTTCCCCTATTGATTCA
AATGGACTGATGGGGTGGCAGATAGTAGGAAAGATGCTCTGTCCCATTTTCTCCACAGAA
CTGGACCCATCTTGCTCTTCTAGGTCCCCTTTCCTTCTCTCTTGGAGAACATGAAATCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAATGCTTTAGAAATTTAACTTCGGAGAGCCGTATTCTGCAGCTTCATCCCTCCCCCCC
CCCCCCCGAGGAAAAAAAAGACCACCACCACTCTTATCACCGCCCCAGCCCTACACACAT
GAACTGAGTCAAAAATCGAAAACCAGACCAACCAAAAGGTGAAATTCTCGGGTAGCGAAG
CTAATTGTTCTGTGTGTTTAATTCCGTTTTCCTTCTAAGTCTCGCCCACACCCCATCCAA
GTCCTCTTTGATTTATTTTCCCTTTTCCAATGAGACTCCGATGGCTGCTCTCCTTAGCCA
AAAAGTGGGTGGGAACACAGCTGAAGGGCTTGGTGGGTGGGTGCTTGTTTAGGTGAAGTC
CAAGTTTTCCAGGGATCAGGCCTGAAGGGTTGGGTGGGGGTCTTGAGGGAGAGAGAGCCG
CAGTCTTTGAGCCGACTAAAAGGCAGAAATTACGGGCTCCGAAATAAATATTTTATTCTA
AGAAAACAAAACCGTTTTAAACAGGTTTTTCTCTTTCCATTTTTGCTCTTACATCTAAGA
TCTTGAGAACAGACTATTTCAAAATAAGCTTTTCCCCTCACTCATAAAACTTGCCCTTTT
ATTTATTTTTGAGCGTTTTATTTTTAACTATCTACTGATTTTTTTTCCCCTATTGATTCA
AATGGACTGATGGGGTGGCAGATAGTAGGAAAGATGCTCTGTCCCATTTTCTCCACAGAA
CTGGACCCATCTTGCTCTTCTAGGTCCCCTTTCCTTCTCTCTTGGAGAACATGAAATCAT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               40-780, gnl|bosTau2|chr12 (30371891-30372644)
               

               
               40-780, gnl|Hg17|chr13 (78073005-78072289)
               

               
               40-780, gnl|Mm7|chr14 (98894901-98894169)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               40-780, gnl|bosTau2|chr12 (30371891-30372644)
               

               
               40-780, gnl|Hg17|chr13 (78073005-78072289)
               

               
               40-780, gnl|Mm7|chr14 (98894901-98894169)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tes (0.207814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	40-780, gnl\|bosTau2\|chr12 (30371891-30372644)
	40-780, gnl\|Hg17\|chr13 (78073005-78072289)
	40-780, gnl\|Mm7\|chr14 (98894901-98894169)