Non-Coding RNA Search

Ss1.1-rtes27_j7.5

Sequence:


               
               TTATTTCTTACTCTTCCTTATTCTACTTCAGACCACTGGTAAGAGGTATCAGAAGAAGCA
TTTATTCAAGTCAAAATTCCTCTTTCTACACAGGTACCACATTTCTGCCTTACACCACCT
CTATTTGTAGAACAGGTCCAGTACCCATACCAAAGTTACTGCCTAGTTACCATGACCAGA
CATTCTTCTGATCACATTCAAAGTCAGTGTCTACAGCAGCTACTTTCATATATGATTACC
AAATTTTACACAATATTTTTCTGTATTTTGTGATGCTACAGTCTGCAAACTTTGTGCATT
ATTGGATAAGGAATGAGTACATTAAATAGACATTTAAAAGAATGATGATCCATTTTCTAA
AGTACACTCAAAATGTTAGAGACAAAGCAACATCTATCAAAGTTGGACTCTGTTGATAGT
AAGAGAGAGGTAGGTTAATAATTACTGTCCTCAGATAAGCAAGAATGCTAAACAATCAAA
GCTGAGATACTGCTGAAAAACATAAATTGAACCTTCCAGCCCTGAGTTTCTAATGTTATG
TGAAAATTATTAAAATAAGCACTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTATTTCTTACTCTTCCTTATTCTACTTCAGACCACTGGTAAGAGGTATCAGAAGAAGCA
TTTATTCAAGTCAAAATTCCTCTTTCTACACAGGTACCACATTTCTGCCTTACACCACCT
CTATTTGTAGAACAGGTCCAGTACCCATACCAAAGTTACTGCCTAGTTACCATGACCAGA
CATTCTTCTGATCACATTCAAAGTCAGTGTCTACAGCAGCTACTTTCATATATGATTACC
AAATTTTACACAATATTTTTCTGTATTTTGTGATGCTACAGTCTGCAAACTTTGTGCATT
ATTGGATAAGGAATGAGTACATTAAATAGACATTTAAAAGAATGATGATCCATTTTCTAA
AGTACACTCAAAATGTTAGAGACAAAGCAACATCTATCAAAGTTGGACTCTGTTGATAGT
AAGAGAGAGGTAGGTTAATAATTACTGTCCTCAGATAAGCAAGAATGCTAAACAATCAAA
GCTGAGATACTGCTGAAAAACATAAATTGAACCTTCCAGCCCTGAGTTTCTAATGTTATG
TGAAAATTATTAAAATAAGCACTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-564, gnl|bosTau2|chr10 (60273664-60273117)
               

               
               3-564, gnl|Hg17|chr14 (73236924-73235756)
               

               
               3-564, gnl|Mm7|chr12 (82138086-82137600)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-564, gnl|bosTau2|chr10 (60273664-60273117)
               

               
               3-564, gnl|Hg17|chr14 (73236924-73235756)
               

               
               3-564, gnl|Mm7|chr12 (82138086-82137600)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tes (0.207814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	3-564, gnl\|bosTau2\|chr10 (60273664-60273117)
	3-564, gnl\|Hg17\|chr14 (73236924-73235756)
	3-564, gnl\|Mm7\|chr12 (82138086-82137600)