Non-Coding RNA Search

Ss1.1-rtes28_b19.5

Sequence:


               
               AGGAGGAAGAATTAGTGATAGGACTGAGGCTTTCAGTGCATACTGGCAACCTTGGAAGGC
AGGAATATGAAACTTTCCCATACTACTTAGCATCAGAATTGAATGGGAGACCCCATTCTG
CCATTTCTGGTGGCAGTGTGGCTCTGCCAGCTGGCCTTCTGCACGGATCCTCTAACAACA
GTGAGAGAGCAATGCGAGCAGATAGAGAAATGTATAAAGGCTCGGGAGCGGCTGGAGCTC
TGTGATCAGCGGGTATCCTCCAGGTCACAGACGGAGGAGGATTGCACAGAGGAGCTCTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGAGGAAGAATTAGTGATAGGACTGAGGCTTTCAGTGCATACTGGCAACCTTGGAAGGC
AGGAATATGAAACTTTCCCATACTACTTAGCATCAGAATTGAATGGGAGACCCCATTCTG
CCATTTCTGGTGGCAGTGTGGCTCTGCCAGCTGGCCTTCTGCACGGATCCTCTAACAACA
GTGAGAGAGCAATGCGAGCAGATAGAGAAATGTATAAAGGCTCGGGAGCGGCTGGAGCTC
TGTGATCAGCGGGTATCCTCCAGGTCACAGACGGAGGAGGATTGCACAGAGGAGCTCTTT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|62202498|gb|AAH93060.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|62202498|gb|AAH93060.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               165-299, gnl|bosTau2|chr18 (38683925-38684054)
               

               
               165-299, gnl|Hg17|chr1 (15879370-15879236)
               

               
               165-299, gnl|Mm7|chr2 (118749132-118749265)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               165-299, gnl|bosTau2|chr18 (38683925-38684054)
               

               
               165-299, gnl|Hg17|chr1 (15879370-15879236)
               

               
               165-299, gnl|Mm7|chr2 (118749132-118749265)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               tes (0.207814)
               

               
               fty (0.17584)
               

               
               nmm (0.132802)
               

               
               ova (0.129132)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)
               

               
               fty (0.17584)
               

               
               nmm (0.132802)
               

               
               ova (0.129132)

	165-299, gnl\|bosTau2\|chr18 (38683925-38684054)
	165-299, gnl\|Hg17\|chr1 (15879370-15879236)
	165-299, gnl\|Mm7\|chr2 (118749132-118749265)