Ss1.1-rtes28_k6.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AATAGATGTAGGGACTTACATTTAGCTGAAACAATAAAAGTAAAAAGGAGCAAGAATGGG GCTGAGAGATGAGTCTGAAGTGTTATATGTATGGGTGGCTTTGTAAAGAAGCCCACAGCA AGGCAGCCAAGAACTGAATAATGGCCTTTTCCAGATGCGACTTTACAAGGGTGGAAATTT GGCGCTAACAGGTTCCTGGGCAGATCGATCACCACTCCATGAAGCGGCAAGTCAAGGTCG TCTTCTTGCTTTAAGAACATTATTATCACAGGGTTATAATGTCAATGCAGTAACCATAGA CCATGTCACCCCATTACATGAAGCCTGCCTTGGAGATCACGTGGCCTGTGCCAGAACGCT TCTGCAAGCTGGAGCTAACGTAAATGCAATCACCATAGACGGTGTGACCCCGTTATTCAA TGCATGCTCACGAGGCAGCAGAAGCTGCACAGAACTGCTTCTAGAATACGGCGCCAAACC CCAGCTGGAGTCCTGTCTTCCTTCTCCTACACATGAGGCCGCCAGCAAAGGTCACCACGA GTGTCTAGAAATACTGATATCCTGGGGCATAGACGTTGACCAAGACATTCCTCATCTGGG AACTCCTCTGTATGTGGCTTGTATGTCCCAGCAGTTCCATTGCATCCGGAAGCTTCTTTA CGCTGGTGCTGACGTACAAAAAGGCAAATACTGGGATACCCCATTACATGCTGCTGCTCA ACAGTCCTGTCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AATAGATGTAGGGACTTACATTTAGCTGAAACAATAAAAGTAAAAAGGAGCAAGAATGGG GCTGAGAGATGAGTCTGAAGTGTTATATGTATGGGTGGCTTTGTAAAGAAGCCCACAGCA AGGCAGCCAAGAACTGAATAATGGCCTTTTCCAGATGCGACTTTACAAGGGTGGAAATTT GGCGCTAACAGGTTCCTGGGCAGATCGATCACCACTCCATGAAGCGGCAAGTCAAGGTCG TCTTCTTGCTTTAAGAACATTATTATCACAGGGTTATAATGTCAATGCAGTAACCATAGA CCATGTCACCCCATTACATGAAGCCTGCCTTGGAGATCACGTGGCCTGTGCCAGAACGCT TCTGCAAGCTGGAGCTAACGTAAATGCAATCACCATAGACGGTGTGACCCCGTTATTCAA TGCATGCTCACGAGGCAGCAGAAGCTGCACAGAACTGCTTCTAGAATACGGCGCCAAACC CCAGCTGGAGTCCTGTCTTCCTTCTCCTACACATGAGGCCGCCAGCAAAGGTCACCACGA GTGTCTAGAAATACTGATATCCTGGGGCATAGACGTTGACCAAGACATTCCTCATCTGGG AACTCCTCTGTATGTGGCTTGTATGTCCCAGCAGTTCCATTGCATCCGGAAGCTTCTTTA CGCTGGTGCTGACGTACAAAAAGGCAAATACTGGGATACCCCATTACATGCTGCTGCTCA ACAGTCCTGTCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 3-193, gnl|bosTau2|chr27 (2173417-2173223) | |
| 3-193, gnl|canFam2|chr16 (56290970-56290809) | |
| 3-193, gnl|dasNov1|scaffold_6699 (83633-83470) | |
| 3-193, gnl|hg17|chr4 (177537736-177537900) | |
| 3-193, gnl|Hg17|chr4 (177537956-177537760) | |
| 3-193, gnl|loxAfr1|scaffold_6922 (53513-53351) | |
| 3-193, gnl|mm7|chr8 (53335030-53334887) | |
| 3-193, gnl|Mm7|chr8 (53334827-53335007) | |
| 3-193, gnl|monDom2|scaffold_9 (55763263-55763413) | |
| 3-193, gnl|panTro1|chr3_random (26757585-26757749) | |
| 3-193, gnl|rheMac2|chr5 (168319222-168319386) | |
| 270-387, gnl|bosTau2|chr27 (2118935-2119052) | |
| 270-387, gnl|Hg17|chr4 (177518722-177518605) | |
| 270-387, gnl|Mm7|chr8 (53352480-53352595) | |
| 529-667, gnl|bosTau2|chr27 (2120105-2120243) | |
| 529-667, gnl|canFam2|chr16 (56312143-56311995) | |
| 529-667, gnl|danRer3|chr14 (61420095-61420223) | |
| 529-667, gnl|dasNov1|scaffold_318 (51246-51392) | |
| 529-667, gnl|echTel1|scaffold_172420 (150-298) | |
| 529-667, gnl|fr1|chrUn (37219871-37220000) | |
| 529-667, gnl|galGal2|chr4 (44946917-44947065) | |
| 529-667, gnl|hg17|chr4 (177517445-177517593) | |
| 529-667, gnl|Hg17|chr4 (177517591-177517453) | |
| 529-667, gnl|loxAfr1|scaffold_14260 (44575-44723) | |
| 529-667, gnl|mm7|chr8 (53354053-53353908) | |
| 529-667, gnl|Mm7|chr8 (53353908-53354046) | |
| 529-667, gnl|monDom2|scaffold_9 (55734691-55734839) | |
| 529-667, gnl|oryCun1|scaffold_188982 (11306-11454) | |
| 529-667, gnl|panTro1|chr3_random (26737270-26737420) | |
| 529-667, gnl|rheMac2|chr5 (168297835-168297983) | |
| 529-667, gnl|rn3|chr16_random (703358-703213) | |
| 529-667, gnl|tetNig1|chr20 (1183021-1183150) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-193, gnl|bosTau2|chr27 (2173417-2173223) | |
| 3-193, gnl|canFam2|chr16 (56290970-56290809) | |
| 3-193, gnl|dasNov1|scaffold_6699 (83633-83470) | |
| 3-193, gnl|hg17|chr4 (177537736-177537900) | |
| 3-193, gnl|Hg17|chr4 (177537956-177537760) | |
| 3-193, gnl|loxAfr1|scaffold_6922 (53513-53351) | |
| 3-193, gnl|mm7|chr8 (53335030-53334887) | |
| 3-193, gnl|Mm7|chr8 (53334827-53335007) | |
| 3-193, gnl|monDom2|scaffold_9 (55763263-55763413) | |
| 3-193, gnl|panTro1|chr3_random (26757585-26757749) | |
| 3-193, gnl|rheMac2|chr5 (168319222-168319386) | |
| 270-387, gnl|bosTau2|chr27 (2118935-2119052) | |
| 270-387, gnl|Hg17|chr4 (177518722-177518605) | |
| 270-387, gnl|Mm7|chr8 (53352480-53352595) | |
| 529-667, gnl|bosTau2|chr27 (2120105-2120243) | |
| 529-667, gnl|canFam2|chr16 (56312143-56311995) | |
| 529-667, gnl|danRer3|chr14 (61420095-61420223) | |
| 529-667, gnl|dasNov1|scaffold_318 (51246-51392) | |
| 529-667, gnl|echTel1|scaffold_172420 (150-298) | |
| 529-667, gnl|fr1|chrUn (37219871-37220000) | |
| 529-667, gnl|galGal2|chr4 (44946917-44947065) | |
| 529-667, gnl|hg17|chr4 (177517445-177517593) | |
| 529-667, gnl|Hg17|chr4 (177517591-177517453) | |
| 529-667, gnl|loxAfr1|scaffold_14260 (44575-44723) | |
| 529-667, gnl|mm7|chr8 (53354053-53353908) | |
| 529-667, gnl|Mm7|chr8 (53353908-53354046) | |
| 529-667, gnl|monDom2|scaffold_9 (55734691-55734839) | |
| 529-667, gnl|oryCun1|scaffold_188982 (11306-11454) | |
| 529-667, gnl|panTro1|chr3_random (26737270-26737420) | |
| 529-667, gnl|rheMac2|chr5 (168297835-168297983) | |
| 529-667, gnl|rn3|chr16_random (703358-703213) | |
| 529-667, gnl|tetNig1|chr20 (1183021-1183150) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (0.623441) |