Non-Coding RNA Search

Ss1.1-rtes29_m19.5

Sequence:


               
               TGACTGTCCAGTTAGATTAGTCTGCTCTTGGAAGAACAACTCAAAAATAGGTGACCTCCT
GGTGACAGGCGAGTGTAATCGTCCTCAGGTAGGAGCGCCAGCACATTTTCCACAAATAGC
TAGTACAGACGATTGTTCAGTAAAGGTATTTGTTGTAAATTGCCAAGCTCTTGGTTGCTA
AAGTAGATTAAAGTTGAATTTGTATGTGTGTATAATAGCTTATATATAATTCTTAAATAG
AAAGTAATTGGTTTTGCATAGTTCTTCATGAGCTCTTTTGGAATAGAAATTCTGCCAGAC
ATTATCAAAATAAGCTTCCTTAGCTTAACAGGCGTTTAAAAGGAAATTGTTTCATACCTC
TTTTTGTTGGCTAGGGAAGGCGTGCTGTGAAGCCAGTGTTCCTCCTTTACAGTCGTCTTT
AGCTCTGCTTTGACTTCTACCACAGTCTGGACAGGATGCTGTGGCAGGTGTGGAAGTACC
TGGGCCAACCATCTCTCTGCACTCATCTGTCAGAGCTGAGGGCACAGTGAGCCCTCAGGT
GGGTCCAGAGAATCTTCTTGGTTATAGTGAGGACATGGTCCAGTTTCAGAGAGTGGAGGG
AGGAGTCAGAGCTATAGTCAAGAAAAGAATAAATGTTATCTGTTGCCTGTATACAGTCTC
TTATGTAATTCCTCATGTTTTTCATAACTGTGCATTTTAATTGACAGTAATGATATTTTG
GTTAACAGCAAAGGCATTAAATCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGACTGTCCAGTTAGATTAGTCTGCTCTTGGAAGAACAACTCAAAAATAGGTGACCTCCT
GGTGACAGGCGAGTGTAATCGTCCTCAGGTAGGAGCGCCAGCACATTTTCCACAAATAGC
TAGTACAGACGATTGTTCAGTAAAGGTATTTGTTGTAAATTGCCAAGCTCTTGGTTGCTA
AAGTAGATTAAAGTTGAATTTGTATGTGTGTATAATAGCTTATATATAATTCTTAAATAG
AAAGTAATTGGTTTTGCATAGTTCTTCATGAGCTCTTTTGGAATAGAAATTCTGCCAGAC
ATTATCAAAATAAGCTTCCTTAGCTTAACAGGCGTTTAAAAGGAAATTGTTTCATACCTC
TTTTTGTTGGCTAGGGAAGGCGTGCTGTGAAGCCAGTGTTCCTCCTTTACAGTCGTCTTT
AGCTCTGCTTTGACTTCTACCACAGTCTGGACAGGATGCTGTGGCAGGTGTGGAAGTACC
TGGGCCAACCATCTCTCTGCACTCATCTGTCAGAGCTGAGGGCACAGTGAGCCCTCAGGT
GGGTCCAGAGAATCTTCTTGGTTATAGTGAGGACATGGTCCAGTTTCAGAGAGTGGAGGG
AGGAGTCAGAGCTATAGTCAAGAAAAGAATAAATGTTATCTGTTGCCTGTATACAGTCTC
TTATGTAATTCCTCATGTTTTTCATAACTGTGCATTTTAATTGACAGTAATGATATTTTG
GTTAACAGCAAAGGCATTAAATCA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               74-744, gnl|bosTau2|chr2 (1253897-1254568)
               

               
               74-744, gnl|Hg17|chr2 (127776156-127775451)
               

               
               74-744, gnl|Mm7|chr18 (32625346-32626032)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               74-744, gnl|bosTau2|chr2 (1253897-1254568)
               

               
               74-744, gnl|Hg17|chr2 (127776156-127775451)
               

               
               74-744, gnl|Mm7|chr18 (32625346-32626032)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               tes (0.207814)
               

               
               aor (0.195274)
               

               
               jca (0.11396)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)
               

               
               aor (0.195274)
               

               
               jca (0.11396)

	74-744, gnl\|bosTau2\|chr2 (1253897-1254568)
	74-744, gnl\|Hg17\|chr2 (127776156-127775451)
	74-744, gnl\|Mm7\|chr18 (32625346-32626032)