Non-Coding RNA Search

Ss1.1-rtes29_m21.5

Sequence:


               
               GCGGGCTCCCACACATCTGCACACACTTACATACAAAGGCTGGGAAGGGTCAGACACCAT
CCAGGCAATTTCAGTCCCCTCCCTTCCCCTCCTTCCTTCCCCCTTGAGTCTCCCTACCAC
CCTGCAGTGTCCTCCCTCACCTCTGGTTGACCATGGCATCAGAAGCAGAGAAAACGTTCC
AGCGGTTTGCTGTCTTTGGAGAATCGTCAAGCAGTGGCACTGAAATGAACAACAAGAACT
TCTCCAAGTTGTGCAAAGACTGTGGCATCATGGACGGCAAGATGGTCACCTCCACTGATG
TGGACATTGTGTTCAGCAAAGTCAAGGCCAAGAATGCCCGAACCGTCACCTTCCAGCAGT
TCCAGGAGGCAATGAAGGAACTGGGCCAGAAGCGATTCAAGGGGAAGAGTCCAGATGAAG
CCTTGGAGAACATTTATAAACTCATGGAGGGCAAGGACCCAGCTACCACCGGTGTTACTA
AAGCAACGACTGTGGGCGGGGTGAGCCGGCTGACGGACACCAGCAAGTACACTGGCACCC
ACAAGGAGCGCTTTGATGAGAGTGGCAAAGGCAAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGGCTCCCACACATCTGCACACACTTACATACAAAGGCTGGGAAGGGTCAGACACCAT
CCAGGCAATTTCAGTCCCCTCCCTTCCCCTCCTTCCTTCCCCCTTGAGTCTCCCTACCAC
CCTGCAGTGTCCTCCCTCACCTCTGGTTGACCATGGCATCAGAAGCAGAGAAAACGTTCC
AGCGGTTTGCTGTCTTTGGAGAATCGTCAAGCAGTGGCACTGAAATGAACAACAAGAACT
TCTCCAAGTTGTGCAAAGACTGTGGCATCATGGACGGCAAGATGGTCACCTCCACTGATG
TGGACATTGTGTTCAGCAAAGTCAAGGCCAAGAATGCCCGAACCGTCACCTTCCAGCAGT
TCCAGGAGGCAATGAAGGAACTGGGCCAGAAGCGATTCAAGGGGAAGAGTCCAGATGAAG
CCTTGGAGAACATTTATAAACTCATGGAGGGCAAGGACCCAGCTACCACCGGTGTTACTA
AAGCAACGACTGTGGGCGGGGTGAGCCGGCTGACGGACACCAGCAAGTACACTGGCACCC
ACAAGGAGCGCTTTGATGAGAGTGGCAAAGGCAAAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61827855|ref|XP_583782.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61827855|ref|XP_583782.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               78-326, gnl|bosTau2|chr10 (15560499-15560741)
               

               
               78-326, gnl|Hg17|chr14 (20568506-20568754)
               

               
               78-326, gnl|Mm7|chr14 (47252367-47252641)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               78-326, gnl|bosTau2|chr10 (15560499-15560741)
               

               
               78-326, gnl|Hg17|chr14 (20568506-20568754)
               

               
               78-326, gnl|Mm7|chr14 (47252367-47252641)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tes (1.03907)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (1.03907)

	78-326, gnl\|bosTau2\|chr10 (15560499-15560741)
	78-326, gnl\|Hg17\|chr14 (20568506-20568754)
	78-326, gnl\|Mm7\|chr14 (47252367-47252641)