Ss1.1-rtes31_c14.5
|
AGATTGCCATACAACATCTGTCTCAGATTTGGAGTTTTCTTCAGATTTCACCCTGAAAAT
CACCAAAACATCTTTGTGCACGGCAATTGCAGGCTACTTCGATATATATTTTGAGAAGAA
CTGCCACAACAAGGTTGTGTTCTCTACGGGCCCCCAAAGTGCCACAACACACTGGAAACA
GACAGTATTTCTATTGGAAAAGCCATTCTCAGTTAAAGCAGGTGAAGGCTTGAAAGGAAA
GATTACAGTGCACAAGAATAAGAAAGATCCACGTTCTCTCATTGTGACCCTCACATTGAA
TAATTCAACTCAGACTTACGGTCTCCAGTGAAAAGGCCAAAAAAGCCCAACTAATTTGCT
GTTTTTATTGTGGGGGAGGGGTGAGTAGGGACTGAGGGTGTGGTGATGACAGATCCTTTC
TGAGTCTCCTCACTTTTCGAGGAGAATGGTAGGAATCTGGTAATTCATCTCAGGAAGGGA
CTGGTTGATCCTAGTGATCCACCCACATGACCACGTTTTTGGAGGTCTAATCAGTGAGTT
TTAGCCAAACGTAACCTCTACATTGAGTTTAGCTGCATTAAAAATCATTTAAATTGGCCT
GAATTTGAAATAGAGACTCTTTTGTTGTTTTTAATAAGTTTCTTACTATAAATTTTAAGA
ACTAGTAACTGATTACTTATTTGGATAATGTTTTATTAAACTAGTAACTGTACACAAGGT
ATTACATGTCTTATTGCAGATTTCCTTTCTGTATTTGCTACATGTCAGGATATAATACAT
TAAAAGAGCAAGTGTAAGGGACTGAAATATGGAAAAGAGACCACACAAACCATATTTGCA
GACAGCTTAGTTGATTGTCCTATAGTTCTGTTCTCATTTTGTAGCTTCTTCTCTCTGTAA
ATATTTGCTATATAGTTTTCTAGTATTGCCCAAGAAATATAGTTTCAATACATTTGCCTT
AGGTTTCATAAAAGTTTTTGAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGATTGCCATACAACATCTGTCTCAGATTTGGAGTTTTCTTCAGATTTCACCCTGAAAAT
CACCAAAACATCTTTGTGCACGGCAATTGCAGGCTACTTCGATATATATTTTGAGAAGAA
CTGCCACAACAAGGTTGTGTTCTCTACGGGCCCCCAAAGTGCCACAACACACTGGAAACA
GACAGTATTTCTATTGGAAAAGCCATTCTCAGTTAAAGCAGGTGAAGGCTTGAAAGGAAA
GATTACAGTGCACAAGAATAAGAAAGATCCACGTTCTCTCATTGTGACCCTCACATTGAA
TAATTCAACTCAGACTTACGGTCTCCAGTGAAAAGGCCAAAAAAGCCCAACTAATTTGCT
GTTTTTATTGTGGGGGAGGGGTGAGTAGGGACTGAGGGTGTGGTGATGACAGATCCTTTC
TGAGTCTCCTCACTTTTCGAGGAGAATGGTAGGAATCTGGTAATTCATCTCAGGAAGGGA
CTGGTTGATCCTAGTGATCCACCCACATGACCACGTTTTTGGAGGTCTAATCAGTGAGTT
TTAGCCAAACGTAACCTCTACATTGAGTTTAGCTGCATTAAAAATCATTTAAATTGGCCT
GAATTTGAAATAGAGACTCTTTTGTTGTTTTTAATAAGTTTCTTACTATAAATTTTAAGA
ACTAGTAACTGATTACTTATTTGGATAATGTTTTATTAAACTAGTAACTGTACACAAGGT
ATTACATGTCTTATTGCAGATTTCCTTTCTGTATTTGCTACATGTCAGGATATAATACAT
TAAAAGAGCAAGTGTAAGGGACTGAAATATGGAAAAGAGACCACACAAACCATATTTGCA
GACAGCTTAGTTGATTGTCCTATAGTTCTGTTCTCATTTTGTAGCTTCTTCTCTCTGTAA
ATATTTGCTATATAGTTTTCTAGTATTGCCCAAGAAATATAGTTTCAATACATTTGCCTT
AGGTTTCATAAAAGTTTTTGAAAA
|
|
220-388, gnl|bosTau2|chr29 (17066873-17066704) |
|
220-388, gnl|canFam2|chr21 (45718959-45719101) |
|
220-388, gnl|dasNov1|scaffold_27294 (17985-18126) |
|
220-388, gnl|echTel1|scaffold_252975 (4106-3958) |
|
220-388, gnl|galGal2|chr5 (1282271-1282129) |
|
220-388, gnl|hg17|chr11 (20486407-20486549) |
|
220-388, gnl|Hg17|chr11 (20486424-20486592) |
|
220-388, gnl|loxAfr1|scaffold_24046 (24246-24388) |
|
220-388, gnl|mm7|chr7 (46078016-46078175) |
|
220-388, gnl|Mm7|chr7 (46078030-46078217) |
|
220-388, gnl|monDom2|scaffold_10 (66723192-66723339) |
|
220-388, gnl|oryCun1|scaffold_117617 (3425-3571) |
|
220-388, gnl|panTro1|chr9 (20730367-20730509) |
|
220-388, gnl|rheMac2|chr14 (51369915-51369773) |
|
220-388, gnl|rn3|chr1 (99745805-99745964) |
| |
|
453-982, gnl|bosTau2|chr29 (17066661-17066117) |
|
453-982, gnl|Hg17|chr11 (20486684-20487229) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
220-388, gnl|bosTau2|chr29 (17066873-17066704) |
|
220-388, gnl|canFam2|chr21 (45718959-45719101) |
|
220-388, gnl|dasNov1|scaffold_27294 (17985-18126) |
|
220-388, gnl|echTel1|scaffold_252975 (4106-3958) |
|
220-388, gnl|galGal2|chr5 (1282271-1282129) |
|
220-388, gnl|hg17|chr11 (20486407-20486549) |
|
220-388, gnl|Hg17|chr11 (20486424-20486592) |
|
220-388, gnl|loxAfr1|scaffold_24046 (24246-24388) |
|
220-388, gnl|mm7|chr7 (46078016-46078175) |
|
220-388, gnl|Mm7|chr7 (46078030-46078217) |
|
220-388, gnl|monDom2|scaffold_10 (66723192-66723339) |
|
220-388, gnl|oryCun1|scaffold_117617 (3425-3571) |
|
220-388, gnl|panTro1|chr9 (20730367-20730509) |
|
220-388, gnl|rheMac2|chr14 (51369915-51369773) |
|
220-388, gnl|rn3|chr1 (99745805-99745964) |
| |
|
453-982, gnl|bosTau2|chr29 (17066661-17066117) |
|
453-982, gnl|Hg17|chr11 (20486684-20487229) |
|
isp (0.300752) |
|
ssp (0.271039) |
|
ret (0.257467) |
|
tes (0.207814) |
|
fcc (0.197785) |
|
mgm (0.180343) |
|
fco (0.157208) |
|
thg (0.126791) |
|
ese (0.126502) |
|
spc (0.113366) |
|
eje (0.0988338) |
|
isp (0.300752) |
|
ssp (0.271039) |
|
ret (0.257467) |
|
tes (0.207814) |
|
fcc (0.197785) |
|
mgm (0.180343) |
|
fco (0.157208) |
|
thg (0.126791) |
|
ese (0.126502) |
|
spc (0.113366) |
|
eje (0.0988338) |
