Non-Coding RNA Search

Ss1.1-rtes31_h21.5

Sequence:


               
               CCCTGTCCTTCACAGAGAACAGGACAAGGCATCAGCCATGTGCCCAGCAGCTCCAAGCAG
CCTCTTCTTGGCCTGCAGCCTGGCCTTGGCACCCTTCCTCACAGTCTCCTGGGAGATTAA
AATGAATGATCTAGAGGAGAAGGATATTGATGAATTCCAATCCAATGGCTTTAAGTGTCC
AACATGCTTTGCAGTGTTAGGAAGAAAGTGTGACAACACTCTCAAGTGGTGCAGAGCAGA
TAAATTGAAGTGTGTTGAATTTTCTGGCATCATAAACACAGGTGTTAAAGACATAGCTGT
TGAAATGAAGAAATGCGTACAAGCAGACCTCTGCAAAGAGACGATAACTTATATGGGTTT
TCCAATTGCTAACCAAAGTAAAAATTGCAGATCAGCCATCAGAAATGGGGCCAAGATCAG
GTCCCCAACTCCCATCATCTTTGTTCTTTTCCTGGAGAAGCTGCTTTATTGAGCTCCTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCTGTCCTTCACAGAGAACAGGACAAGGCATCAGCCATGTGCCCAGCAGCTCCAAGCAG
CCTCTTCTTGGCCTGCAGCCTGGCCTTGGCACCCTTCCTCACAGTCTCCTGGGAGATTAA
AATGAATGATCTAGAGGAGAAGGATATTGATGAATTCCAATCCAATGGCTTTAAGTGTCC
AACATGCTTTGCAGTGTTAGGAAGAAAGTGTGACAACACTCTCAAGTGGTGCAGAGCAGA
TAAATTGAAGTGTGTTGAATTTTCTGGCATCATAAACACAGGTGTTAAAGACATAGCTGT
TGAAATGAAGAAATGCGTACAAGCAGACCTCTGCAAAGAGACGATAACTTATATGGGTTT
TCCAATTGCTAACCAAAGTAAAAATTGCAGATCAGCCATCAGAAATGGGGCCAAGATCAG
GTCCCCAACTCCCATCATCTTTGTTCTTTTCCTGGAGAAGCTGCTTTATTGAGCTCCTCC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|46430514|ref|NP_997410.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|46430514|ref|NP_997410.1|

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

Help | Less info


               
               3-104, gnl|bosTau2|chr7 (28668315-28668416)
               

               
               3-104, gnl|Hg17|chr1 (245181451-245181560)
               

               
               3-104, gnl|Mm7|chr11 (58534045-58533945)
               


               
               249-369, gnl|bosTau2|chr8 (43413234-43413115)

Aligned organism(s): 4 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-104, gnl|bosTau2|chr7 (28668315-28668416)
               

               
               3-104, gnl|Hg17|chr1 (245181451-245181560)
               

               
               3-104, gnl|Mm7|chr11 (58534045-58533945)
               


               
               249-369, gnl|bosTau2|chr8 (43413234-43413115)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               tes (0.831255)
               

               
               cte (0.29274)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.831255)
               

               
               cte (0.29274)

	3-104, gnl\|bosTau2\|chr7 (28668315-28668416)
	3-104, gnl\|Hg17\|chr1 (245181451-245181560)
	3-104, gnl\|Mm7\|chr11 (58534045-58533945)

	249-369, gnl\|bosTau2\|chr8 (43413234-43413115)