Ss1.1-rtes31_o6.5
|
AGGACATCCGGTCTTCCTTTGTAAGGCTAAACGGCTTTCTTTGGTGCGGCAAGGTTTGAA
TCTCAGCTGTTGGCCTTTGCTTTCTCTGTCGCCAGCTGCCTTTGCTCACCCGCTCCTCGG
ACTTGGCGAAAGACCTCCAAACACTCTCCCTGTGGCCTTATTCCTCTCGGTTATGATTGT
ATTCGTTCGTCGAGAAGCATCACCTACTGTCTTTGCCTAGGAAGGACATTTTATCCATAG
TCACAGTAATGGCAGCTGAAGTACAAATGGTACTTTACGAAGATGATTCAGTGCAAGTAC
AATACGTTGATGGTTCCAGATTGCAGCTTTCACCCTGTGGTTCTGAATTTTTATTTGAAA
AGGCACCACCTATTTCAGCACATCCTTTAGAACAACCAGAAAGAATTCGCCAAAGGACAC
ACTTTGTAATCAGCACTTACCGAGAGCAGCTACAGCGAGCCCTAGATTTTAGAAATTCTT
TTGCTACTTGCCCTTTTTTATCTGCAAACATCATACCTTCTGAAAGAAAAAAGCGTATCT
TCATTGACATCACAGAAGTGAGATGGCCGGGTCTTGATACTGATGACAGCATGATATGTA
TGCAGAGTGGCACTGTGAAAGTATCATCCTTAGATGGTCACGCATACCTTTGCCTGCCCA
AATCTCAGCATGAATTTACAGTACATTTTTTGTGTAAAGTAAGCCAGAAGCCAGACTCAC
TTGTAATACTGTCAGAAAAAAATAATCAAGCCCGAAAGGACAAACTAGTTGAAAAAGCTG
GCAAAATCTATACATATGGAAGTTTATCAGGACAGAGACTGAAGAATAAAGAAAATGAAC
TTTATTATGAGATCATGAAATCCAGAGATCCTTTAGAGAAGAAGAGTTGTATAAATGGAA
CTGAAGGGAGGGAGGAGCTGGCTTCACCTGTTACAAAACACACACCCATCTACACATGGG
TAAAGCAGTGCTGCTCTGTGGACTCTTGTCCAGAGGAATGGAAATACCCTTTGTTTTTAG
CACTTTGTTTTCAGAATAAAATCAGCAGTATGTCTGGAATTGATGCACATGTCACCCAGG
AGAGAATTTTAACTTCTGAGATTTCCAAGGAAGGAGGAAGAGAAGTTTCTGTTCTTCCCA
TGGCCCTGTTACTGAGCTGCCCTGTCCCACACCTGCACAGGTGGAATTTTTGTGATTCAC
TTTCACAGAGACAGTTTGGTGAAGAATATTCCTATCCTGAATTAGTAAAAGTGGTTTGGT
ACAAAGGTACTATCTATAGAGACAAGAGAAAACATATTCAGTAAATAACCTTCCTCCAGA
TAGACCAGGAAGAATGTTCTCTGTGTGTTCTCTAATGGAACAGGCAACCAGAATTCTTCA
ACATTGTGCCAAGACGAGGCTTTCTTTAAGCCATAACTATCGTATATG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGGACATCCGGTCTTCCTTTGTAAGGCTAAACGGCTTTCTTTGGTGCGGCAAGGTTTGAA
TCTCAGCTGTTGGCCTTTGCTTTCTCTGTCGCCAGCTGCCTTTGCTCACCCGCTCCTCGG
ACTTGGCGAAAGACCTCCAAACACTCTCCCTGTGGCCTTATTCCTCTCGGTTATGATTGT
ATTCGTTCGTCGAGAAGCATCACCTACTGTCTTTGCCTAGGAAGGACATTTTATCCATAG
TCACAGTAATGGCAGCTGAAGTACAAATGGTACTTTACGAAGATGATTCAGTGCAAGTAC
AATACGTTGATGGTTCCAGATTGCAGCTTTCACCCTGTGGTTCTGAATTTTTATTTGAAA
AGGCACCACCTATTTCAGCACATCCTTTAGAACAACCAGAAAGAATTCGCCAAAGGACAC
ACTTTGTAATCAGCACTTACCGAGAGCAGCTACAGCGAGCCCTAGATTTTAGAAATTCTT
TTGCTACTTGCCCTTTTTTATCTGCAAACATCATACCTTCTGAAAGAAAAAAGCGTATCT
TCATTGACATCACAGAAGTGAGATGGCCGGGTCTTGATACTGATGACAGCATGATATGTA
TGCAGAGTGGCACTGTGAAAGTATCATCCTTAGATGGTCACGCATACCTTTGCCTGCCCA
AATCTCAGCATGAATTTACAGTACATTTTTTGTGTAAAGTAAGCCAGAAGCCAGACTCAC
TTGTAATACTGTCAGAAAAAAATAATCAAGCCCGAAAGGACAAACTAGTTGAAAAAGCTG
GCAAAATCTATACATATGGAAGTTTATCAGGACAGAGACTGAAGAATAAAGAAAATGAAC
TTTATTATGAGATCATGAAATCCAGAGATCCTTTAGAGAAGAAGAGTTGTATAAATGGAA
CTGAAGGGAGGGAGGAGCTGGCTTCACCTGTTACAAAACACACACCCATCTACACATGGG
TAAAGCAGTGCTGCTCTGTGGACTCTTGTCCAGAGGAATGGAAATACCCTTTGTTTTTAG
CACTTTGTTTTCAGAATAAAATCAGCAGTATGTCTGGAATTGATGCACATGTCACCCAGG
AGAGAATTTTAACTTCTGAGATTTCCAAGGAAGGAGGAAGAGAAGTTTCTGTTCTTCCCA
TGGCCCTGTTACTGAGCTGCCCTGTCCCACACCTGCACAGGTGGAATTTTTGTGATTCAC
TTTCACAGAGACAGTTTGGTGAAGAATATTCCTATCCTGAATTAGTAAAAGTGGTTTGGT
ACAAAGGTACTATCTATAGAGACAAGAGAAAACATATTCAGTAAATAACCTTCCTCCAGA
TAGACCAGGAAGAATGTTCTCTGTGTGTTCTCTAATGGAACAGGCAACCAGAATTCTTCA
ACATTGTGCCAAGACGAGGCTTTCTTTAAGCCATAACTATCGTATATG
|
|
gi|21315008|gb|AAH30738.1| |
Protein identifier
|
gi|21315008|gb|AAH30738.1| |
|
1-209, gnl|bosTau2|chr20 (16899796-16900006) |
|
1-209, gnl|Hg17|chr5 (43551058-43550806) |
| |
|
212-444, gnl|bosTau2|chr20 (16933648-16933880) |
|
212-444, gnl|canFam2|chr4 (69700913-69700766) |
|
212-444, gnl|galGal2|chrZ (6788435-6788582) |
|
212-444, gnl|hg17|chr5 (43545052-43545199) |
|
212-444, gnl|loxAfr1|scaffold_214479 (417-270) |
|
212-444, gnl|mm7|chr13 (116675627-116675480) |
|
212-444, gnl|Mm7|chr13 (116675446-116675674) |
|
212-444, gnl|monDom2|scaffold_20 (27218002-27217855) |
|
212-444, gnl|panTro1|chr4 (72973790-72973643) |
|
212-444, gnl|rheMac2|chr6 (43446565-43446712) |
|
212-444, gnl|rn3|chr2 (51574246-51574099) |
| |
|
532-1182, gnl|bosTau2|chr20 (16936407-16937054) |
|
532-1182, gnl|Hg17|chr5 (43542255-43541605) |
|
532-1182, gnl|Mm7|chr13 (116678882-116679532) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-209, gnl|bosTau2|chr20 (16899796-16900006) |
|
1-209, gnl|Hg17|chr5 (43551058-43550806) |
| |
|
212-444, gnl|bosTau2|chr20 (16933648-16933880) |
|
212-444, gnl|canFam2|chr4 (69700913-69700766) |
|
212-444, gnl|galGal2|chrZ (6788435-6788582) |
|
212-444, gnl|hg17|chr5 (43545052-43545199) |
|
212-444, gnl|loxAfr1|scaffold_214479 (417-270) |
|
212-444, gnl|mm7|chr13 (116675627-116675480) |
|
212-444, gnl|Mm7|chr13 (116675446-116675674) |
|
212-444, gnl|monDom2|scaffold_20 (27218002-27217855) |
|
212-444, gnl|panTro1|chr4 (72973790-72973643) |
|
212-444, gnl|rheMac2|chr6 (43446565-43446712) |
|
212-444, gnl|rn3|chr2 (51574246-51574099) |
| |
|
532-1182, gnl|bosTau2|chr20 (16936407-16937054) |
|
532-1182, gnl|Hg17|chr5 (43542255-43541605) |
|
532-1182, gnl|Mm7|chr13 (116678882-116679532) |
|
tes (0.207814) |
|
bla (0.124347) |
|
tes (0.207814) |
|
bla (0.124347) |
