Ss1.1-rtes34_m11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATCAAGAGTACAATAGATGCTTCTAATATCAGTTGCTTTCAGAATAATGTAGAGATTCAC GTTGCACATATTCAGAGTGGCCTGAGCCAGATGGGAAACTTACATGCCTTTGCAGCAAAT AACACCAACAGAGACTGAGTAAAAGATACAATTACTGCAGTGGAGAACATGAAGAAACAT GGCCTTTTTGTGCATTATGCATGGCATTGTGGAAATTCCACCTAGAAAATTACAACTCCA ATTCATTTAGTTGATCACCATCTCAGTCTTCAAAAAATAATATCATGAGATGTGGGAAGT CCTCATTTTAAGGAAGCCACTGGAATAAAGGTGGGAAATATGGACTTTACAAGTATATAT GATGTATACTTGCAATGTGACATGGTTCTATAGATCATTTTATAATAATAAATATTTTAA TTTATCATAATT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATCAAGAGTACAATAGATGCTTCTAATATCAGTTGCTTTCAGAATAATGTAGAGATTCAC GTTGCACATATTCAGAGTGGCCTGAGCCAGATGGGAAACTTACATGCCTTTGCAGCAAAT AACACCAACAGAGACTGAGTAAAAGATACAATTACTGCAGTGGAGAACATGAAGAAACAT GGCCTTTTTGTGCATTATGCATGGCATTGTGGAAATTCCACCTAGAAAATTACAACTCCA ATTCATTTAGTTGATCACCATCTCAGTCTTCAAAAAATAATATCATGAGATGTGGGAAGT CCTCATTTTAAGGAAGCCACTGGAATAAAGGTGGGAAATATGGACTTTACAAGTATATAT GATGTATACTTGCAATGTGACATGGTTCTATAGATCATTTTATAATAATAAATATTTTAA TTTATCATAATT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 262-381, + strand, RNAz p=0.562671 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 262-381, + strand, RNAz p=0.562671 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of BC045625, + |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 148-432, gnl|bosTau2|chr16 (17639578-17639295) | |
| 148-432, gnl|Hg17|chr1 (222726593-222726310) | |
| 148-432, gnl|Mm7|chr1 (180669456-180669728) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 148-432, gnl|bosTau2|chr16 (17639578-17639295) | |
| 148-432, gnl|Hg17|chr1 (222726593-222726310) | |
| 148-432, gnl|Mm7|chr1 (180669456-180669728) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| vin (0.332557) | |
| sme (0.305437) | |
| tes (0.207814) | |
| tbr (0.154178) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| vin (0.332557) | |
| sme (0.305437) | |
| tes (0.207814) | |
| tbr (0.154178) |